STRINGSTRING
isl2b isl2b casp3a casp3a bdnf bdnf rab34a rab34a robo2 robo2 gsna gsna ntn1b ntn1b scin scin casp9 casp9 gsnb gsnb acta1b acta1b scinlb scinlb casp8 casp8 slit1a slit1a bcl2a bcl2a ntn2 ntn2 adcyap1r1b adcyap1r1b pxdn pxdn ntn1a ntn1a scinla scinla robo2-2 robo2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
isl2bInsulin gene enhancer protein isl-2b; Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in the regional specification of the myotome and also in target recognition by the caudal primary neuron. (358 aa)
casp3aCaspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (282 aa)
bdnfBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (270 aa)
rab34aRAB34, member RAS oncogene family a. (260 aa)
robo2Roundabout, axon guidance receptor, homolog 2 (Drosophila). (1387 aa)
gsnaGelsolin a. (729 aa)
ntn1bNetrin 1b. (602 aa)
scinScinderin. (733 aa)
casp9Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (436 aa)
gsnbGelsolin b. (728 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
scinlbScinderin-like b. (720 aa)
casp8Caspase 8, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (476 aa)
slit1aSlit homolog 1a (Drosophila). (1524 aa)
bcl2aB-cell leukemia/lymphoma 2. (228 aa)
ntn2Netrin 2. (609 aa)
adcyap1r1bAdenylate cyclase-activating polypeptide 1a (pituitary) receptor type I; Belongs to the G-protein coupled receptor 2 family. (445 aa)
pxdnPeroxidasin. (1460 aa)
ntn1aNetrin-1a. (603 aa)
scinlaScinderin-like a. (720 aa)
robo2-2Roundabout, axon guidance receptor, homolog 2 (Drosophila). (136 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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