Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100330864 | mcm3 | ENSDARP00000008907 | ENSDARP00000003671 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | DNA helicase; Belongs to the MCM family. | 0.639 |
| LOC100330864 | mcm3l | ENSDARP00000008907 | ENSDARP00000054652 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | DNA helicase; Belongs to the MCM family. | 0.690 |
| LOC100330864 | mcm4 | ENSDARP00000008907 | ENSDARP00000058563 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | DNA helicase; Belongs to the MCM family. | 0.773 |
| LOC100330864 | pcna | ENSDARP00000008907 | ENSDARP00000070780 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.723 |
| LOC100330864 | rbbp4 | ENSDARP00000008907 | ENSDARP00000048143 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Histone-binding protein RBBP4; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | 0.520 |
| LOC100330864 | tp53 | ENSDARP00000008907 | ENSDARP00000116736 | Ribonucleoside-diphosphate reductase subunit M2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.603 |
| abcc2 | abcf2a | ENSDARP00000025026 | ENSDARP00000056639 | ATP-binding cassette, sub-family C (CFTR/MRP), member 2. | ATP-binding cassette, sub-family F (GCN20), member 2a. | 0.536 |
| abcf2a | abcc2 | ENSDARP00000056639 | ENSDARP00000025026 | ATP-binding cassette, sub-family F (GCN20), member 2a. | ATP-binding cassette, sub-family C (CFTR/MRP), member 2. | 0.536 |
| abcf2a | hspe1 | ENSDARP00000056639 | ENSDARP00000108249 | ATP-binding cassette, sub-family F (GCN20), member 2a. | Heat shock 10 protein 1 (Chaperonin 10); Belongs to the GroES chaperonin family. | 0.565 |
| abcf2a | psmc3 | ENSDARP00000056639 | ENSDARP00000026554 | ATP-binding cassette, sub-family F (GCN20), member 2a. | Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. | 0.474 |
| arntl1a | myca | ENSDARP00000004223 | ENSDARP00000100455 | Aryl hydrocarbon receptor nuclear translocator-like 1a. | Transcriptional regulator Myc-A; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | 0.443 |
| atf3 | dusp1 | ENSDARP00000027550 | ENSDARP00000137487 | Activating transcription factor 3. | Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | 0.771 |
| atf3 | dusp2 | ENSDARP00000027550 | ENSDARP00000133300 | Activating transcription factor 3. | Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. | 0.450 |
| atf3 | hspa5 | ENSDARP00000027550 | ENSDARP00000131952 | Activating transcription factor 3. | Immunoglobulin binding protein; Belongs to the heat shock protein 70 family. | 0.473 |
| atf3 | il1b | ENSDARP00000027550 | ENSDARP00000140751 | Activating transcription factor 3. | Interleukin-1. | 0.597 |
| atf3 | nfkbiaa | ENSDARP00000027550 | ENSDARP00000109941 | Activating transcription factor 3. | Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. | 0.544 |
| atf3 | tp53 | ENSDARP00000027550 | ENSDARP00000116736 | Activating transcription factor 3. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.878 |
| atf3 | xbp1 | ENSDARP00000027550 | ENSDARP00000106586 | Activating transcription factor 3. | Transcription factor Treb5. | 0.777 |
| ccne2 | gapdh | ENSDARP00000141058 | ENSDARP00000063799 | Cyclin E2; Belongs to the cyclin family. | Glyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...] | 0.625 |
| ccne2 | mcm3 | ENSDARP00000141058 | ENSDARP00000003671 | Cyclin E2; Belongs to the cyclin family. | DNA helicase; Belongs to the MCM family. | 0.520 |
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