Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ENSDARP00000125042 | fgf10a | ENSDARP00000125042 | ENSDARP00000048580 | Patched 1. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.454 |
| ENSDARP00000125042 | gli1 | ENSDARP00000125042 | ENSDARP00000129932 | Patched 1. | GLI family zinc finger 1. | 0.961 |
| ENSDARP00000125042 | gli2a | ENSDARP00000125042 | ENSDARP00000010693 | Patched 1. | GLI family zinc finger 2a. | 0.959 |
| ENSDARP00000125042 | ift80 | ENSDARP00000125042 | ENSDARP00000116409 | Patched 1. | Intraflagellar transport 80 homolog (Chlamydomonas). | 0.563 |
| ENSDARP00000125042 | ihha | ENSDARP00000125042 | ENSDARP00000076101 | Patched 1. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.970 |
| ENSDARP00000125042 | ihhb | ENSDARP00000125042 | ENSDARP00000076199 | Patched 1. | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | 0.992 |
| ENSDARP00000125042 | shha | ENSDARP00000125042 | ENSDARP00000125090 | Patched 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.999 |
| ENSDARP00000125042 | shhb | ENSDARP00000125042 | ENSDARP00000056746 | Patched 1. | Tiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. | 0.996 |
| ENSDARP00000125042 | smo | ENSDARP00000125042 | ENSDARP00000013486 | Patched 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.996 |
| ENSDARP00000125042 | wnt5b | ENSDARP00000125042 | ENSDARP00000134193 | Patched 1. | Protein Wnt-5b; Ligand for members of the frizzled family of seven transmembrane receptors. Can activate or inhibit canonical Wnt signaling, depending on receptor context. Required during embryogenesis for extension of the primary anterior-posterior axis. | 0.442 |
| fgf10a | ENSDARP00000125042 | ENSDARP00000048580 | ENSDARP00000125042 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Patched 1. | 0.454 |
| fgf10a | gata6 | ENSDARP00000048580 | ENSDARP00000137653 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | GATA-binding protein 6. | 0.434 |
| fgf10a | nkx2.1 | ENSDARP00000048580 | ENSDARP00000025546 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | NK2 homeobox 1b. | 0.465 |
| fgf10a | nkx2.4b | ENSDARP00000048580 | ENSDARP00000138951 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | NK2 homeobox 1a. | 0.454 |
| fgf10a | ptch1 | ENSDARP00000048580 | ENSDARP00000025418 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Protein patched homolog 1. | 0.409 |
| fgf10a | ptch2 | ENSDARP00000048580 | ENSDARP00000071771 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. | 0.490 |
| fgf10a | shha | ENSDARP00000048580 | ENSDARP00000125090 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.853 |
| fgf10a | shhb | ENSDARP00000048580 | ENSDARP00000056746 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Tiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. | 0.598 |
| fgf10a | sox2 | ENSDARP00000048580 | ENSDARP00000095266 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Transcription factor Sox-2; Transcriptional activator. May function as a switch in neuronal development (By similarity). Downstream SRRT target that mediates the promotion of neural stem cell self-renewal (By similarity). | 0.575 |
| fgf10a | wnt3a | ENSDARP00000048580 | ENSDARP00000089165 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.567 |
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