Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100334116 | acta1b | ENSDARP00000101310 | ENSDARP00000058628 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Actin alpha 1, skeletal muscle b. | 0.617 |
| LOC100334116 | cdh1 | ENSDARP00000101310 | ENSDARP00000136579 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Cadherin 1, type 1, E-cadherin (epithelial); Cadherins are calcium-dependent cell adhesion proteins. | 0.726 |
| LOC100334116 | cdh2 | ENSDARP00000101310 | ENSDARP00000003949 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Cadherin-2; Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion (By similarity). Cadherins contribute to the sorting of heterogeneous cell types, and thereby play an important role during embryonic development. Required for normal neural tube morphogenesis. Required to allow mid- and hindbrain neurons to reach and maintain their appropriate positions within the neural tube by restricting neuronal motility within the embryonic mid- and hindbrain. | 0.480 |
| LOC100334116 | egf | ENSDARP00000101310 | ENSDARP00000069126 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Epidermal growth factor. | 0.852 |
| LOC100334116 | egfra | ENSDARP00000101310 | ENSDARP00000125265 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Epidermal growth factor receptor precursor. | 0.736 |
| LOC100334116 | ptk2ab | ENSDARP00000101310 | ENSDARP00000042715 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.561 |
| LOC100334116 | rhoab | ENSDARP00000101310 | ENSDARP00000018377 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Rho-related GTP-binding protein RhoA-B; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. | 0.466 |
| LOC100334116 | snai2 | ENSDARP00000101310 | ENSDARP00000058570 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Snail homolog 2 (Drosophila). | 0.452 |
| LOC100334116 | stat3 | ENSDARP00000101310 | ENSDARP00000095292 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Signal transducer and activator of transcription. | 0.832 |
| LOC100334116 | tgfb1a | ENSDARP00000101310 | ENSDARP00000060838 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.652 |
| LOC100334116 | tgfb1b | ENSDARP00000101310 | ENSDARP00000122056 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.668 |
| acta1b | LOC100334116 | ENSDARP00000058628 | ENSDARP00000101310 | Actin alpha 1, skeletal muscle b. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.617 |
| acta1b | cdh1 | ENSDARP00000058628 | ENSDARP00000136579 | Actin alpha 1, skeletal muscle b. | Cadherin 1, type 1, E-cadherin (epithelial); Cadherins are calcium-dependent cell adhesion proteins. | 0.968 |
| acta1b | cdh2 | ENSDARP00000058628 | ENSDARP00000003949 | Actin alpha 1, skeletal muscle b. | Cadherin-2; Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion (By similarity). Cadherins contribute to the sorting of heterogeneous cell types, and thereby play an important role during embryonic development. Required for normal neural tube morphogenesis. Required to allow mid- and hindbrain neurons to reach and maintain their appropriate positions within the neural tube by restricting neuronal motility within the embryonic mid- and hindbrain. | 0.935 |
| acta1b | cttn | ENSDARP00000058628 | ENSDARP00000007792 | Actin alpha 1, skeletal muscle b. | Cortactin. | 0.960 |
| acta1b | egf | ENSDARP00000058628 | ENSDARP00000069126 | Actin alpha 1, skeletal muscle b. | Epidermal growth factor. | 0.840 |
| acta1b | egfra | ENSDARP00000058628 | ENSDARP00000125265 | Actin alpha 1, skeletal muscle b. | Epidermal growth factor receptor precursor. | 0.769 |
| acta1b | hcls1 | ENSDARP00000058628 | ENSDARP00000119144 | Actin alpha 1, skeletal muscle b. | Hematopoietic cell-specific Lyn substrate 1. | 0.960 |
| acta1b | hgfa | ENSDARP00000058628 | ENSDARP00000091725 | Actin alpha 1, skeletal muscle b. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.630 |
| acta1b | itga5 | ENSDARP00000058628 | ENSDARP00000027718 | Actin alpha 1, skeletal muscle b. | Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family. | 0.660 |
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