STRINGSTRING
gad2 gad2 tnfrsf1a tnfrsf1a hmox1a hmox1a gabarapa gabarapa oxt oxt jun jun ptger4a ptger4a stat3 stat3 mif mif tnfrsf1b tnfrsf1b trpv1 trpv1 trpa1a trpa1a kcna1a kcna1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gad2Glutamate decarboxylase 2. (583 aa)
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (389 aa)
hmox1aHeme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. (272 aa)
gabarapaGABA(A) receptor-associated protein a. (122 aa)
oxtOxytocin; Belongs to the vasopressin/oxytocin family. (154 aa)
junJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (308 aa)
ptger4aProstaglandin E receptor 4 (subtype EP4) a; Belongs to the G-protein coupled receptor 1 family. (403 aa)
stat3Signal transducer and activator of transcription. (806 aa)
mifMacrophage migration inhibitory factor. (115 aa)
tnfrsf1bTumor necrosis factor receptor superfamily, member 1B. (425 aa)
trpv1Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family. (813 aa)
trpa1aTransient receptor potential cation channel, subfamily A, member 1a. (1126 aa)
kcna1aPotassium voltage-gated channel, shaker-related subfamily, member 1a; Belongs to the potassium channel family. (492 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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