STRINGSTRING
myo5aa myo5aa mbd3b mbd3b ush1gb ush1gb ush1c ush1c slc26a4 slc26a4 myo5ab myo5ab acta1b acta1b cdh23 cdh23 myo7aa myo7aa pcdh15b pcdh15b myo5c myo5c myo5b myo5b pcdh15a pcdh15a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
myo5aaMyosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1890 aa)
mbd3bMethyl-CpG-binding domain protein 3b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1031 aa)
ush1gbUsher syndrome 1Gb (autosomal recessive). (488 aa)
ush1cUsher syndrome 1C (Autosomal recessive, severe). (548 aa)
slc26a4Pendrin; Sodium-independent transporter of chloride and iodide. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (760 aa)
myo5abMyosin VAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1823 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
cdh23Cadherin-related 23. (2883 aa)
myo7aaMyosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2190 aa)
pcdh15bProtocadherin-related 15b. (1907 aa)
myo5cMyosin VC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1746 aa)
myo5bMyosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1839 aa)
pcdh15aProtocadherin-related 15a. (1796 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.