STRINGSTRING
kcnk2a kcnk2a myo7ab myo7ab cdh23 cdh23 kcnk2b kcnk2b lhfpl5b lhfpl5b whrna whrna ush1c ush1c trpa1a trpa1a whrnb whrnb trpv4 trpv4 pcdh15a pcdh15a kcnk4a kcnk4a pcdh15b pcdh15b myo7aa myo7aa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kcnk2aPotassium channel, subfamily K, member 2a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (426 aa)
myo7abMyosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2190 aa)
cdh23Cadherin-related 23. (2883 aa)
kcnk2bPotassium channel, subfamily K, member 2b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (384 aa)
lhfpl5bLHFPL tetraspan subfamily member 5b. (221 aa)
whrnaWhirlin a. (939 aa)
ush1cUsher syndrome 1C (Autosomal recessive, severe). (548 aa)
trpa1aTransient receptor potential cation channel, subfamily A, member 1a. (1126 aa)
whrnbWhirlin b. (946 aa)
trpv4Transient receptor potential cation channel, subfamily V, member 4. (856 aa)
pcdh15aProtocadherin-related 15a. (1796 aa)
kcnk4aPotassium channel, subfamily K, member 4a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (542 aa)
pcdh15bProtocadherin-related 15b. (1907 aa)
myo7aaMyosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2190 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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