STRINGSTRING
aldh6a1 aldh6a1 cd209 cd209 entpd5a entpd5a lectin lectin icam3 icam3 ttc8 ttc8 mrc2 mrc2 rabepk rabepk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
aldh6a1Aldehyde dehydrogenase 6 family, member A1. (525 aa)
cd209CD209 molecule. (343 aa)
entpd5aEctonucleoside triphosphate diphosphohydrolase 5a; Belongs to the GDA1/CD39 NTPase family. (450 aa)
lectinLectin. (152 aa)
icam3Intercellular adhesion molecule 3. (360 aa)
ttc8Tetratricopeptide repeat domain 8. (268 aa)
mrc2Mannose receptor, C type 2. (1473 aa)
rabepkRab9 effector protein with kelch motifs; Rab9 effector required for endosome to trans-Golgi network (TGN) transport. (351 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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