STRINGSTRING
dhx33 dhx33 irf3 irf3 nod2 nod2 cd40 cd40 caspbl caspbl icam3 icam3 hsp70.1 hsp70.1 c3a.2 c3a.2 lectin lectin becn1 becn1 il10 il10 mapk3 mapk3 pim2 pim2 cxcr4b cxcr4b tlr2 tlr2 cd36 cd36 cd209 cd209 traf6 traf6 caspa caspa itgb3b itgb3b myd88 myd88 itgb3a itgb3a hsp70.3 hsp70.3 marco marco tlr9 tlr9 pparg pparg il1b il1b tlr1 tlr1 fcer1g fcer1g tbk1 tbk1 nod1 nod1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (680 aa)
irf3Interferon regulatory factor 3. (426 aa)
nod2Nucleotide-binding oligomerization domain-containing 2. (980 aa)
cd40CD40 molecule, TNF receptor superfamily member 5. (286 aa)
caspblCaspase b,-like; Belongs to the peptidase C14A family. (409 aa)
icam3Intercellular adhesion molecule 3. (360 aa)
hsp70.1Heat shock cognate 70-kd protein, tandem duplicate 1; Belongs to the heat shock protein 70 family. (643 aa)
c3a.2Complement component c3a, duplicate 2. (1656 aa)
lectinLectin. (152 aa)
becn1Beclin-1; Plays a central role in autophagy. Acts as core subunit of different PI3K complex forms that mediate formation of phosphatidylinositol 3- phosphate and are believed to play a role in multiple membrane trafficking pathways: PI3KC3-C1 is involved in initiation of autophagosomes and PI3KC3-C2 in maturation of autophagosomes and endocytosis (By similarity). Involved in regulation of degradative endocytic trafficking and required for the abcission step in cytokinesis, probably in the context of PI3KC3-C2 (By similarity). Essential for the formation of PI3KC3-C2 but not PI3KC3-C1 P [...] (447 aa)
il10Interleukin-10. (180 aa)
mapk3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (392 aa)
pim2Serine/threonine-protein kinase pim-2; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily. (310 aa)
cxcr4bChemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. (353 aa)
tlr2Toll-like receptor 2. (788 aa)
cd36CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. (465 aa)
cd209CD209 molecule. (343 aa)
traf6TNF receptor-associated factor 6; E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction. (542 aa)
caspaCaspase a subunit p10; Thiol protease which cleaves IL-1 beta (il1b), releasing the mature cytokine which is involved in a variety of inflammatory processes, and mediates apoptosis. Component of the NLRP1 inflammasome, which plays a crucial role in innate immunity and inflammation. In response to pathogens and other damage-associated signals, recruited to the NLRP1 inflammasome in its precursor form. Its subsequent activation causes the cleavage of pro-il1b into the midformed il1b, which then evetually leads to il1b maturation and secretion in the extracellular milieu. Required for the [...] (383 aa)
itgb3bIntegrin beta; Belongs to the integrin beta chain family. (790 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and Il-1 receptor signaling pathway in the innate immune response. (284 aa)
itgb3aIntegrin beta; Belongs to the integrin beta chain family. (785 aa)
hsp70.3Heat shock cognate 70-kd protein, tandem duplicate 3; Belongs to the heat shock protein 70 family. (643 aa)
marcoMacrophage receptor with collagenous structure. (450 aa)
tlr9Toll-like receptor 9; Belongs to the Toll-like receptor family. (1069 aa)
ppargPeroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (116 aa)
il1bInterleukin-1. (284 aa)
tlr1Toll-like receptor 1; Belongs to the Toll-like receptor family. (795 aa)
fcer1gFc fragment of IgE, high affinity I, receptor for; gamma polypeptide. (95 aa)
tbk1TANK-binding kinase 1. (727 aa)
nod1Nucleotide-binding oligomerization domain-containing 1. (903 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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