STRINGSTRING
dync2li1 dync2li1 kif7 kif7 dynlrb1 dynlrb1 ift88 ift88 ptch1 ptch1 kif3c kif3c ift57 ift57 smo smo gli2a gli2a kifap3b kifap3b tctex1d2 tctex1d2 wdr60 wdr60 ppfia1 ppfia1 sufu sufu kif3b kif3b dynlrb2 dynlrb2 ENSDARP00000125042 ENSDARP00000125042 kif3cb kif3cb kif3a kif3a arrb1 arrb1 tctn1 tctn1 bbs1 bbs1 ift46 ift46 bbs7 bbs7 ihhb ihhb ihha ihha plk1 plk1 dynll1 dynll1 wdr34 wdr34 gpr161 gpr161 ptch2 ptch2 dynlt3 dynlt3 ift52 ift52 ift172 ift172
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dync2li1Cytoplasmic dynein 2 light intermediate chain 1; Required for correct intraflagellar transport (IFT), the bi- directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Involved in the regulation of ciliary length. (358 aa)
kif7Kinesin-like protein kif7; Acts downstream of smo as an intracellular repressor of hedgehog signaling pathway, mainly through the suppression of gli1 activity. This negative regulatory effect is enhanced in conjunction with the suppressor of fused (sufu) protein. Positively regulates gli2a activity by promoting its dissociation from sufu. Involved in the regulation of microtubular dynamics. (1363 aa)
dynlrb1Dynein light chain roadblock. (96 aa)
ift88Intraflagellar transport 88 homolog. (824 aa)
ptch1Protein patched homolog 1. (1475 aa)
kif3cKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (754 aa)
ift57Intraflagellar transport protein 57 homolog; Required for the formation of cilia. Essential for differentiation and survival of sensory neurons. May also have pro- apoptotic function. (407 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (822 aa)
gli2aGLI family zinc finger 2a. (1439 aa)
kifap3bKinesin-associated protein 3b. (772 aa)
tctex1d2Tctex1 domain-containing 2. (162 aa)
wdr60WD repeat domain 60. (1047 aa)
ppfia1PTPRF-interacting protein alpha 1. (534 aa)
sufuSuppressor of fused homolog. (485 aa)
kif3bKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (775 aa)
dynlrb2Dynein light chain roadblock-type 2. (112 aa)
ENSDARP00000125042Patched 1. (120 aa)
kif3cbKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (759 aa)
kif3aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (701 aa)
arrb1Arrestin, beta 1. (418 aa)
tctn1Tectonic family member 1. (534 aa)
bbs1Bardet-Biedl syndrome 1. (588 aa)
ift46Intraflagellar transport protein 46 homolog; Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in early embryonic development; Belongs to the IFT46 family. (355 aa)
bbs7Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
ihhbIndian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. (412 aa)
ihhaHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
plk1Serine/threonine-protein kinase PLK. (595 aa)
dynll1Dynein light chain. (89 aa)
wdr34WD repeat domain 34. (501 aa)
gpr161G-protein coupled receptor 161; Key negative regulator of Shh signaling during neural tube development. Recruited to primary cilia and acts as a regulator of the PKA-dependent basal repression machinery in Shh signaling by increasing cAMP levels, leading to promote the PKA-dependent processing of gli3 into gli3r and repress the Shh signaling. In presence of shh, it is removed from primary cilia, preventing its activity and allowing activation of the Shh signaling (By similarity). Required in left/right patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer vesicle; [...] (526 aa)
ptch2Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. (1442 aa)
dynlt3T-complex-associated-testis-expressed 1-like. (115 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
ift172Intraflagellar transport protein 172 homolog; Required for the maintenance and formation of cilia. (1745 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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