Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DYNC2H1 | ENSDARP00000125042 | ENSDARP00000152917 | ENSDARP00000125042 | Dynein cytoplasmic 2 heavy chain 1. | Patched 1. | 0.551 |
| DYNC2H1 | gli2a | ENSDARP00000152917 | ENSDARP00000010693 | Dynein cytoplasmic 2 heavy chain 1. | GLI family zinc finger 2a. | 0.767 |
| DYNC2H1 | ihhb | ENSDARP00000152917 | ENSDARP00000076199 | Dynein cytoplasmic 2 heavy chain 1. | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | 0.435 |
| DYNC2H1 | kif7 | ENSDARP00000152917 | ENSDARP00000041576 | Dynein cytoplasmic 2 heavy chain 1. | Kinesin-like protein kif7; Acts downstream of smo as an intracellular repressor of hedgehog signaling pathway, mainly through the suppression of gli1 activity. This negative regulatory effect is enhanced in conjunction with the suppressor of fused (sufu) protein. Positively regulates gli2a activity by promoting its dissociation from sufu. Involved in the regulation of microtubular dynamics. | 0.721 |
| DYNC2H1 | ptch1 | ENSDARP00000152917 | ENSDARP00000025418 | Dynein cytoplasmic 2 heavy chain 1. | Protein patched homolog 1. | 0.558 |
| DYNC2H1 | ptch2 | ENSDARP00000152917 | ENSDARP00000071771 | Dynein cytoplasmic 2 heavy chain 1. | Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. | 0.491 |
| DYNC2H1 | shha | ENSDARP00000152917 | ENSDARP00000125090 | Dynein cytoplasmic 2 heavy chain 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.511 |
| DYNC2H1 | sufu | ENSDARP00000152917 | ENSDARP00000133214 | Dynein cytoplasmic 2 heavy chain 1. | Suppressor of fused homolog. | 0.714 |
| DYNC2H1 | talpid3 | ENSDARP00000152917 | ENSDARP00000131742 | Dynein cytoplasmic 2 heavy chain 1. | Protein TALPID3; Required for ciliogenesis and sonic hedgehog/SHH signaling. Belongs to the TALPID3 family. | 0.551 |
| DYNC2H1 | wdr34 | ENSDARP00000152917 | ENSDARP00000074797 | Dynein cytoplasmic 2 heavy chain 1. | WD repeat domain 34. | 0.967 |
| ENSDARP00000125042 | DYNC2H1 | ENSDARP00000125042 | ENSDARP00000152917 | Patched 1. | Dynein cytoplasmic 2 heavy chain 1. | 0.551 |
| ENSDARP00000125042 | gli2a | ENSDARP00000125042 | ENSDARP00000010693 | Patched 1. | GLI family zinc finger 2a. | 0.959 |
| ENSDARP00000125042 | ihha | ENSDARP00000125042 | ENSDARP00000076101 | Patched 1. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.970 |
| ENSDARP00000125042 | ihhb | ENSDARP00000125042 | ENSDARP00000076199 | Patched 1. | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | 0.992 |
| ENSDARP00000125042 | kif7 | ENSDARP00000125042 | ENSDARP00000041576 | Patched 1. | Kinesin-like protein kif7; Acts downstream of smo as an intracellular repressor of hedgehog signaling pathway, mainly through the suppression of gli1 activity. This negative regulatory effect is enhanced in conjunction with the suppressor of fused (sufu) protein. Positively regulates gli2a activity by promoting its dissociation from sufu. Involved in the regulation of microtubular dynamics. | 0.808 |
| ENSDARP00000125042 | shha | ENSDARP00000125042 | ENSDARP00000125090 | Patched 1. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.999 |
| ENSDARP00000125042 | sufu | ENSDARP00000125042 | ENSDARP00000133214 | Patched 1. | Suppressor of fused homolog. | 0.938 |
| ENSDARP00000125042 | talpid3 | ENSDARP00000125042 | ENSDARP00000131742 | Patched 1. | Protein TALPID3; Required for ciliogenesis and sonic hedgehog/SHH signaling. Belongs to the TALPID3 family. | 0.492 |
| dvl1b | fat1a | ENSDARP00000094527 | ENSDARP00000112805 | Dishevelled segment polarity protein 1b. | FAT atypical cadherin 1a. | 0.409 |
| fat1a | dvl1b | ENSDARP00000112805 | ENSDARP00000094527 | FAT atypical cadherin 1a. | Dishevelled segment polarity protein 1b. | 0.409 |
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