Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bmp2b | bmp4 | ENSDARP00000107417 | ENSDARP00000069635 | Bone morphogenetic protein 2b. | Bone morphogenetic protein 4. | 0.462 |
| bmp2b | bmp7a | ENSDARP00000107417 | ENSDARP00000017352 | Bone morphogenetic protein 2b. | Bone morphogenetic protein 7a. | 0.801 |
| bmp2b | chrd | ENSDARP00000107417 | ENSDARP00000045109 | Bone morphogenetic protein 2b. | Chordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes (By similarity); Belongs to the chordin family. | 0.996 |
| bmp2b | fsta | ENSDARP00000107417 | ENSDARP00000122591 | Bone morphogenetic protein 2b. | Follistatin-A; Binds directly to activin and functions as an activin antagonist. Specific inhibitor of the biosynthesis and secretion of pituitary follicle stimulating hormone (fsh) (By similarity). Inhibits bmp-signaling during later stages of development including late phases of dorsoventral patterning, to refine the early pattern set up by the interaction of chordino and bmp2/4. Not involved in organizer function or early phases of dorsoventral pattern formation. | 0.749 |
| bmp2b | fstb | ENSDARP00000107417 | ENSDARP00000075218 | Bone morphogenetic protein 2b. | Follistatin 2. | 0.748 |
| bmp2b | smad1 | ENSDARP00000107417 | ENSDARP00000030150 | Bone morphogenetic protein 2b. | Mothers against decapentaplegic homolog 1; Involved in ventralization. May mediate Bmp2b signaling during embryonic dorsal-ventral pattern formation, and may itself be a transcriptional target for Smad5-mediated Bmp2b signaling. Belongs to the dwarfin/SMAD family. | 0.947 |
| bmp2b | szl | ENSDARP00000107417 | ENSDARP00000133257 | Bone morphogenetic protein 2b. | Szl protein. | 0.744 |
| bmp2b | tll1 | ENSDARP00000107417 | ENSDARP00000054471 | Bone morphogenetic protein 2b. | Dorsal-ventral patterning tolloid-like protein 1; Required for patterning ventral tissues of the tail. May increase bone morphogenetic protein (BMP) activity at the end of gastrulation by proteolytic cleavage of chordin and release of BMP from inactive complexes. | 0.799 |
| bmp4 | bmp2b | ENSDARP00000069635 | ENSDARP00000107417 | Bone morphogenetic protein 4. | Bone morphogenetic protein 2b. | 0.462 |
| bmp4 | bmp7a | ENSDARP00000069635 | ENSDARP00000017352 | Bone morphogenetic protein 4. | Bone morphogenetic protein 7a. | 0.480 |
| bmp4 | chrd | ENSDARP00000069635 | ENSDARP00000045109 | Bone morphogenetic protein 4. | Chordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes (By similarity); Belongs to the chordin family. | 0.996 |
| bmp4 | fsta | ENSDARP00000069635 | ENSDARP00000122591 | Bone morphogenetic protein 4. | Follistatin-A; Binds directly to activin and functions as an activin antagonist. Specific inhibitor of the biosynthesis and secretion of pituitary follicle stimulating hormone (fsh) (By similarity). Inhibits bmp-signaling during later stages of development including late phases of dorsoventral patterning, to refine the early pattern set up by the interaction of chordino and bmp2/4. Not involved in organizer function or early phases of dorsoventral pattern formation. | 0.906 |
| bmp4 | fstb | ENSDARP00000069635 | ENSDARP00000075218 | Bone morphogenetic protein 4. | Follistatin 2. | 0.880 |
| bmp4 | furina | ENSDARP00000069635 | ENSDARP00000085903 | Bone morphogenetic protein 4. | Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. | 0.493 |
| bmp4 | furinb | ENSDARP00000069635 | ENSDARP00000095400 | Bone morphogenetic protein 4. | Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. | 0.492 |
| bmp4 | smad1 | ENSDARP00000069635 | ENSDARP00000030150 | Bone morphogenetic protein 4. | Mothers against decapentaplegic homolog 1; Involved in ventralization. May mediate Bmp2b signaling during embryonic dorsal-ventral pattern formation, and may itself be a transcriptional target for Smad5-mediated Bmp2b signaling. Belongs to the dwarfin/SMAD family. | 0.871 |
| bmp4 | szl | ENSDARP00000069635 | ENSDARP00000133257 | Bone morphogenetic protein 4. | Szl protein. | 0.615 |
| bmp4 | tll1 | ENSDARP00000069635 | ENSDARP00000054471 | Bone morphogenetic protein 4. | Dorsal-ventral patterning tolloid-like protein 1; Required for patterning ventral tissues of the tail. May increase bone morphogenetic protein (BMP) activity at the end of gastrulation by proteolytic cleavage of chordin and release of BMP from inactive complexes. | 0.749 |
| bmp7a | bmp2b | ENSDARP00000017352 | ENSDARP00000107417 | Bone morphogenetic protein 7a. | Bone morphogenetic protein 2b. | 0.801 |
| bmp7a | bmp4 | ENSDARP00000017352 | ENSDARP00000069635 | Bone morphogenetic protein 7a. | Bone morphogenetic protein 4. | 0.480 |
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