Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apoea | apoeb | ENSDARP00000133853 | ENSDARP00000058964 | Apolipoprotein Ea. | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | 0.594 |
| apoea | hmgcra | ENSDARP00000133853 | ENSDARP00000088231 | Apolipoprotein Ea. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.511 |
| apoea | hmgcrb | ENSDARP00000133853 | ENSDARP00000133184 | Apolipoprotein Ea. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.534 |
| apoea | vcam1b | ENSDARP00000133853 | ENSDARP00000144690 | Apolipoprotein Ea. | Vascular cell adhesion molecule 1b. | 0.499 |
| apoeb | apoea | ENSDARP00000058964 | ENSDARP00000133853 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Apolipoprotein Ea. | 0.594 |
| apoeb | hmgcra | ENSDARP00000058964 | ENSDARP00000088231 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.633 |
| apoeb | hmgcrb | ENSDARP00000058964 | ENSDARP00000133184 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.634 |
| apoeb | itgam | ENSDARP00000058964 | ENSDARP00000133914 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Integrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family. | 0.479 |
| apoeb | klf17 | ENSDARP00000058964 | ENSDARP00000056654 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Kruppel-like factor 17. | 0.400 |
| apoeb | mmp9 | ENSDARP00000058964 | ENSDARP00000062844 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Matrix metallopeptidase 9. | 0.638 |
| apoeb | serpine1 | ENSDARP00000058964 | ENSDARP00000073803 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. | 0.454 |
| apoeb | thbd | ENSDARP00000058964 | ENSDARP00000124069 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Thrombomodulin. | 0.411 |
| apoeb | vcam1b | ENSDARP00000058964 | ENSDARP00000144690 | Apolipoprotein Eb; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. Belongs to the apolipoprotein A1/A4/E family. | Vascular cell adhesion molecule 1b. | 0.754 |
| cd40 | chuk | ENSDARP00000114636 | ENSDARP00000013115 | CD40 molecule, TNF receptor superfamily member 5. | Inhibitor of nuclear factor kappa-B kinase subunit alpha; Phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Phosphorylates 'Ser-10' of histone H3 at NF-kappa-B-regulated promoters during inflammatory responses triggered by cytokines; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. I-kappa-B kinase subfamily. | 0.539 |
| cd40 | cxcr5 | ENSDARP00000114636 | ENSDARP00000010091 | CD40 molecule, TNF receptor superfamily member 5. | Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.695 |
| cd40 | foxp3a | ENSDARP00000114636 | ENSDARP00000080214 | CD40 molecule, TNF receptor superfamily member 5. | Forkhead box protein. | 0.612 |
| cd40 | itgam | ENSDARP00000114636 | ENSDARP00000133914 | CD40 molecule, TNF receptor superfamily member 5. | Integrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family. | 0.645 |
| cd40 | mmp9 | ENSDARP00000114636 | ENSDARP00000062844 | CD40 molecule, TNF receptor superfamily member 5. | Matrix metallopeptidase 9. | 0.545 |
| cd40 | rel | ENSDARP00000114636 | ENSDARP00000072078 | CD40 molecule, TNF receptor superfamily member 5. | V-rel avian reticuloendotheliosis viral oncogene homolog. | 0.409 |
| cd40 | rela | ENSDARP00000114636 | ENSDARP00000133181 | CD40 molecule, TNF receptor superfamily member 5. | V-rel avian reticuloendotheliosis viral oncogene homolog A. | 0.459 |
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