STRINGSTRING
pex13 pex13 zbtb20 zbtb20 tbx5a tbx5a braf braf ist1 ist1 dhodh dhodh ndr1 ndr1 txnl4b txnl4b drd3 drd3 atxn1l atxn1l phlpp2 phlpp2 dhx38 dhx38 Pmfbp1 Pmfbp1 sox5 sox5 zfhx3 zfhx3 pmfbp1 pmfbp1 ap1g1 ap1g1 pdlim7 pdlim7 fgfr4 fgfr4 ZNF821 ZNF821 pkd1l2a pkd1l2a pkp4 pkp4 lmna lmna
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pex13Peroxisomal biogenesis factor 13. (416 aa)
zbtb20Zinc finger and BTB domain-containing 20. (687 aa)
tbx5aT-box transcription factor TBX5-A; Required for pectoral fin formation. Together with tbx5b, involved in eye and heart development. Required for the looping stage of heart development. May bind to the core DNA motif of promoters. (492 aa)
brafB-Raf proto-oncogene, serine/threonine kinase. (817 aa)
ist1IST1 factor-associated with ESCRT-III. (354 aa)
dhodhDihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (407 aa)
ndr1Nodal-related 1. (392 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
drd3Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (466 aa)
atxn1lAtaxin 1-like. (765 aa)
phlpp2PH domain and leucine-rich repeat protein phosphatase 2. (297 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1258 aa)
Pmfbp1Si:ch73-315f9.2. (640 aa)
sox5SRY-box transcription factor 5. (759 aa)
zfhx3Zinc finger homeobox 3. (3838 aa)
pmfbp1Polyamine modulated factor 1-binding protein 1. (199 aa)
ap1g1AP-1 complex subunit gamma. (819 aa)
pdlim7PDZ and LIM domain protein 7; May function as a scaffold on which the coordinated assembly of proteins can occur. May play a role as an adapter that, via its PDZ domain, localizes LIM-binding proteins to actin filaments of both skeletal muscle and nonmuscle tissues (By similarity). (419 aa)
fgfr4Fibroblast growth factor receptor 4; Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays a role in the regulation of cell proliferation, differentiation and migration, and in regulation of lipid metabolism, bile acid biosynthesis, glucose uptake, vitamin D metabolism and phosphate homeostasis. Required for normal down- regulation of the expression of CYP7A1, the rate-limiting enzyme in bile acid synthesis, in response to FGF19. Phosphorylates PLCG1 and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation o [...] (923 aa)
ZNF821Zinc finger protein 821. (408 aa)
pkd1l2aPolycystic kidney disease 1-like 2a. (2484 aa)
pkp4Plakophilin 4. (1136 aa)
lmnaLamin A; Belongs to the intermediate filament family. (675 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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