STRINGSTRING
X1WCU6_DANRE X1WCU6_DANRE tor1 tor1 tor1l2 tor1l2 pfn1 pfn1 rabif rabif pfn2 pfn2 atxn2 atxn2 ptenb ptenb tor1l1 tor1l1 acta1b acta1b pfn2l pfn2l ric8a ric8a tor1l3 tor1l3 cfl1 cfl1 limk1b limk1b cfl2 cfl2 cfl1l cfl1l dscama dscama tor2a tor2a limk1a limk1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X1WCU6_DANREProfilin; Belongs to the profilin family. (127 aa)
tor1Torsin. (336 aa)
tor1l2Torsin. (355 aa)
pfn1Profilin; Belongs to the profilin family. (141 aa)
rabifRAB-interacting factor. (132 aa)
pfn2Profilin; Belongs to the profilin family. (140 aa)
atxn2Ataxin 2. (1112 aa)
ptenbPhosphatase and tensin homolog B; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (422 aa)
tor1l1Torsin. (323 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
pfn2lProfilin; Belongs to the profilin family. (139 aa)
ric8aSynembryn-A; Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein (By similarity). (550 aa)
tor1l3Torsin. (328 aa)
cfl1Muscle cofilin 2; Belongs to the actin-binding proteins ADF family. (165 aa)
limk1bLIM domain kinase 1b. (615 aa)
cfl2Cofilin 2 (Muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
cfl1lCofilin 1 (non-muscle),-like; Belongs to the actin-binding proteins ADF family. (163 aa)
dscamaDown syndrome cell adhesion molecule a. (2036 aa)
tor2aTorsin. (310 aa)
limk1aLIM domain kinase 1a. (648 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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