STRINGSTRING
saa saa il10 il10 mpeg1.1 mpeg1.1 tlr3 tlr3 tnfa tnfa mpx mpx c3a.1 c3a.1 tlr2 tlr2 tgfb1a tgfb1a cxcr1 cxcr1 eef1a1l1 eef1a1l1 il1b il1b nsg2 nsg2 cxcl8a cxcl8a flii flii il6 il6 ighz ighz ifng1 ifng1 il13 il13 foxp3a foxp3a mpeg1.2 mpeg1.2 rpl13a rpl13a il22 il22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
saaSerum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (121 aa)
il10Interleukin-10. (180 aa)
mpeg1.1Macrophage-expressed 1, tandem duplicate 1. (718 aa)
tlr3Toll-like receptor 3; Belongs to the Toll-like receptor family. (903 aa)
tnfaTumor necrosis factor a (TNF superfamily, member 2). (234 aa)
mpxMyeloid-specific peroxidase. (893 aa)
c3a.1Complement component c3a, duplicate 1. (1643 aa)
tlr2Toll-like receptor 2. (788 aa)
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
cxcr1Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family. (364 aa)
eef1a1l1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (462 aa)
il1bInterleukin-1. (284 aa)
nsg2Neuronal vesicle-trafficking-associated 2. (183 aa)
cxcl8aInterleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (98 aa)
fliiFLII actin-remodeling protein. (1259 aa)
il6Interleukin 6 (interferon, beta 2). (231 aa)
ighzImmunoglobulin heavy constant zeta. (442 aa)
ifng1Interferon gamma 1. (179 aa)
il13Interleukin 4/13A. (157 aa)
foxp3aForkhead box protein. (419 aa)
mpeg1.2Novel protein similar to H.sapiens MPEG1, macrophage expressed gene 1 (MPEG1, zgc:110354). (713 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
il22Interleukin 22. (213 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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