(21 nodes) (2018) High fish density delays wound healing in Atlantic salmon (Salmo salar). network (Danio rerio)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	ltb4r	Leukotriene B4 receptor; Belongs to the G-protein coupled receptor 1 family. (380 aa)
	F1QAH0_DANRE	Si:dkey-148a17.6; Belongs to the G-protein coupled receptor 1 family. (356 aa)
	ENSDARP00000142921	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family. (339 aa)
	ENSDARP00000134695	Si:ch73-55i23.1. (548 aa)
	zgc:194202	Similar to rCG22237. (295 aa)
	pla2g4ab	Phospholipase A2. (720 aa)
	pla2g4f.2	Phospholipase A2. (809 aa)
	alox5b.1	Arachidonate 5-lipoxygenase b, tandem duplicate 1. (697 aa)
	muc5.2	Mucin 5.2. (6126 aa)
	lta4h	Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family. (611 aa)
	zgc:101699	Zgc:101699. (554 aa)
	LOC100148581	Si:ch73-55i23.1. (591 aa)
	mmp9	Matrix metallopeptidase 9. (680 aa)
	cyp4f3	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family. (313 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	alox5a	Arachidonate 5-lipoxygenase a. (674 aa)
	pla2g4aa	Cytosolic phospholipase A2; Selectively hydrolyzes arachidonyl phospholipids in the sn-2 position releasing arachidonic acid. Together with its lysophospholipid activity, it is implicated in the initiation of the inflammatory response. (741 aa)
	mmp13a-2	Matrix metallopeptidase 13a. (475 aa)
	muc5.1	Mucin 5.1, oligomeric mucus/gel-forming. (5282 aa)
	alox5b.2	Arachidonate 5-lipoxygenase b, tandem duplicate 2. (676 aa)
	pla2g4f.1	Phospholipase A2. (837 aa)

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSDARP00000134695	ENSDARP00000142921	ENSDARP00000134695	ENSDARP00000142921	Si:ch73-55i23.1.	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	0.743
ENSDARP00000134695	F1QAH0_DANRE	ENSDARP00000134695	ENSDARP00000142947	Si:ch73-55i23.1.	Si:dkey-148a17.6; Belongs to the G-protein coupled receptor 1 family.	0.743
ENSDARP00000134695	alox5a	ENSDARP00000134695	ENSDARP00000074335	Si:ch73-55i23.1.	Arachidonate 5-lipoxygenase a.	0.841
ENSDARP00000134695	alox5b.1	ENSDARP00000134695	ENSDARP00000129360	Si:ch73-55i23.1.	Arachidonate 5-lipoxygenase b, tandem duplicate 1.	0.879
ENSDARP00000134695	alox5b.2	ENSDARP00000134695	ENSDARP00000128135	Si:ch73-55i23.1.	Arachidonate 5-lipoxygenase b, tandem duplicate 2.	0.879
ENSDARP00000134695	cyp4f3	ENSDARP00000134695	ENSDARP00000063441	Si:ch73-55i23.1.	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.	0.965
ENSDARP00000134695	lta4h	ENSDARP00000134695	ENSDARP00000011882	Si:ch73-55i23.1.	Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.	0.469
ENSDARP00000134695	ltb4r	ENSDARP00000134695	ENSDARP00000128869	Si:ch73-55i23.1.	Leukotriene B4 receptor; Belongs to the G-protein coupled receptor 1 family.	0.666
ENSDARP00000134695	zgc:194202	ENSDARP00000134695	ENSDARP00000131830	Si:ch73-55i23.1.	Similar to rCG22237.	0.743
ENSDARP00000142921	ENSDARP00000134695	ENSDARP00000142921	ENSDARP00000134695	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Si:ch73-55i23.1.	0.743
ENSDARP00000142921	LOC100148581	ENSDARP00000142921	ENSDARP00000061692	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Si:ch73-55i23.1.	0.713
ENSDARP00000142921	alox5a	ENSDARP00000142921	ENSDARP00000074335	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Arachidonate 5-lipoxygenase a.	0.645
ENSDARP00000142921	alox5b.1	ENSDARP00000142921	ENSDARP00000129360	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Arachidonate 5-lipoxygenase b, tandem duplicate 1.	0.807
ENSDARP00000142921	alox5b.2	ENSDARP00000142921	ENSDARP00000128135	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Arachidonate 5-lipoxygenase b, tandem duplicate 2.	0.807
ENSDARP00000142921	cyp4f3	ENSDARP00000142921	ENSDARP00000063441	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.	0.802
ENSDARP00000142921	lta4h	ENSDARP00000142921	ENSDARP00000011882	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.	0.623
ENSDARP00000142921	pla2g4aa	ENSDARP00000142921	ENSDARP00000090686	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Cytosolic phospholipase A2; Selectively hydrolyzes arachidonyl phospholipids in the sn-2 position releasing arachidonic acid. Together with its lysophospholipid activity, it is implicated in the initiation of the inflammatory response.	0.405
ENSDARP00000142921	pla2g4ab	ENSDARP00000142921	ENSDARP00000130121	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Phospholipase A2.	0.453
ENSDARP00000142921	pla2g4f.1	ENSDARP00000142921	ENSDARP00000128420	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Phospholipase A2.	0.554
ENSDARP00000142921	pla2g4f.2	ENSDARP00000142921	ENSDARP00000129605	Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family.	Phospholipase A2.	0.551

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