STRINGSTRING
mmp2 mmp2 ctsk ctsk elavl3 elavl3 sgk1 sgk1 sparc sparc nr3c1 nr3c1 mmp9 mmp9 timp2a timp2a mtor mtor rictorb rictorb ets2 ets2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmp2Matrix metalloproteinase 2. (657 aa)
ctskCathepsin K; Belongs to the peptidase C1 family. (333 aa)
elavl3ELAV-like protein; Belongs to the RRM elav family. (359 aa)
sgk1Serine/threonine-protein kinase Sgk1; Protein kinase that may play an important role in cellular stress response. May be involved in the regulation of processes such as cell survival, neuronal excitability and renal sodium excretion (By similarity); Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (433 aa)
sparcSecreted protein, acidic, cysteine-rich (osteonectin). (291 aa)
nr3c1Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (746 aa)
mmp9Matrix metallopeptidase 9. (680 aa)
timp2aTissue inhibitor of metalloproteinase 2. (220 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2563 aa)
rictorbRPTOR-independent companion of MTOR, complex 2b. (1698 aa)
ets2V-ets avian erythroblastosis virus E26 oncogene homolog 2. (439 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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