Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bmp4 | chd7 | ENSDARP00000069635 | ENSDARP00000114372 | Bone morphogenetic protein 4. | Chromodomain helicase DNA-binding protein 7. | 0.430 |
| bmp4 | fgf2 | ENSDARP00000069635 | ENSDARP00000132803 | Bone morphogenetic protein 4. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.852 |
| bmp4 | foxd3 | ENSDARP00000069635 | ENSDARP00000107660 | Bone morphogenetic protein 4. | Forkhead box D3. | 0.576 |
| bmp4 | mef2ca | ENSDARP00000069635 | ENSDARP00000089908 | Bone morphogenetic protein 4. | Myocyte enhancer factor 2ca. | 0.674 |
| bmp4 | notch1a | ENSDARP00000069635 | ENSDARP00000137942 | Bone morphogenetic protein 4. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.841 |
| bmp4 | pax3a | ENSDARP00000069635 | ENSDARP00000037761 | Bone morphogenetic protein 4. | Transcription factor PAX3. | 0.691 |
| bmp4 | snai2 | ENSDARP00000069635 | ENSDARP00000058570 | Bone morphogenetic protein 4. | Snail homolog 2 (Drosophila). | 0.651 |
| bmp4 | sox10 | ENSDARP00000069635 | ENSDARP00000100237 | Bone morphogenetic protein 4. | HMG-box transcription factor Sox10. | 0.641 |
| bmp4 | twist1a | ENSDARP00000069635 | ENSDARP00000043594 | Bone morphogenetic protein 4. | Twist family bHLH transcription factor 1a. | 0.605 |
| chd7 | bmp4 | ENSDARP00000114372 | ENSDARP00000069635 | Chromodomain helicase DNA-binding protein 7. | Bone morphogenetic protein 4. | 0.430 |
| chd7 | pax3a | ENSDARP00000114372 | ENSDARP00000037761 | Chromodomain helicase DNA-binding protein 7. | Transcription factor PAX3. | 0.413 |
| chd7 | snai2 | ENSDARP00000114372 | ENSDARP00000058570 | Chromodomain helicase DNA-binding protein 7. | Snail homolog 2 (Drosophila). | 0.492 |
| chd7 | sox10 | ENSDARP00000114372 | ENSDARP00000100237 | Chromodomain helicase DNA-binding protein 7. | HMG-box transcription factor Sox10. | 0.761 |
| elp1 | phox2bb | ENSDARP00000135682 | ENSDARP00000130156 | Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. | Paired-like homeobox 2Bb. | 0.453 |
| fgf2 | bmp4 | ENSDARP00000132803 | ENSDARP00000069635 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Bone morphogenetic protein 4. | 0.852 |
| fgf2 | notch1a | ENSDARP00000132803 | ENSDARP00000137942 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.741 |
| foxd3 | bmp4 | ENSDARP00000107660 | ENSDARP00000069635 | Forkhead box D3. | Bone morphogenetic protein 4. | 0.576 |
| foxd3 | notch1a | ENSDARP00000107660 | ENSDARP00000137942 | Forkhead box D3. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.517 |
| foxd3 | pax3a | ENSDARP00000107660 | ENSDARP00000037761 | Forkhead box D3. | Transcription factor PAX3. | 0.943 |
| foxd3 | phox2bb | ENSDARP00000107660 | ENSDARP00000130156 | Forkhead box D3. | Paired-like homeobox 2Bb. | 0.671 |
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