STRINGSTRING
irf1a irf1a ifng1r ifng1r gbp1 gbp1 pold1 pold1 il10rb il10rb stat2 stat2 jak1 jak1 ifnphi1 ifnphi1 stat1a stat1a psen2 psen2 stat1b stat1b eef1a2 eef1a2 eef1a1l1 eef1a1l1 irf1b irf1b SAMD9 SAMD9 eif2ak2 eif2ak2 helz2 helz2 isg20 isg20 ifit12 ifit12 tyk2 tyk2 irf9 irf9 ifng1 ifng1 eef1a1b eef1a1b cd9a cd9a isg15 isg15 dhx58 dhx58 pola1 pola1 usp18 usp18 eef1a1a eef1a1a vtcn1 vtcn1 si:dkey-37o8.1 si:dkey-37o8.1 crfb4 crfb4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
irf1aInterferon regulatory factor. (251 aa)
ifng1rInterferon gamma-related. (170 aa)
gbp1Guanylate-binding protein 1. (621 aa)
pold1DNA polymerase. (1105 aa)
il10rbInterleukin 10 receptor, beta. (367 aa)
stat2Signal transducer and activator of transcription. (836 aa)
jak1Tyrosine-protein kinase JAK1; Tyrosine kinase of the non-receptor type. Appears to be required in early development for specific cell migrations (epiboly), expression of homeobox protein goosecoid and formation of anterior structures. (1153 aa)
ifnphi1Interferon phi 1. (185 aa)
stat1aSignal transducer and activator of transcription. (749 aa)
psen2Presenilin-2; Probable catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family. (441 aa)
stat1bSignal transducer and activator of transcription. (725 aa)
eef1a2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)
eef1a1l1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (462 aa)
irf1bInterferon regulatory factor. (287 aa)
SAMD9SAM domain-containing protein. (1612 aa)
eif2ak2Eukaryotic translation initiation factor 2-alpha kinase 2. (682 aa)
helz2Helicase with zinc finger 2, transcriptional coactivator. (2656 aa)
isg20Interferon-stimulated exonuclease gene. (338 aa)
ifit12Interferon-induced protein with tetratricopeptide repeats 12. (468 aa)
tyk2Tyrosine-protein kinase. (1165 aa)
irf9Interferon regulatory factor 9. (428 aa)
ifng1Interferon gamma 1. (179 aa)
eef1a1bElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
cd9aTetraspanin. (228 aa)
isg15ISG15 ubiquitin-like modifier. (157 aa)
dhx58DEXH (Asp-Glu-X-His) box polypeptide 58. (679 aa)
pola1DNA polymerase. (1468 aa)
usp18Ubiquitin-specific peptidase 18; Belongs to the peptidase C19 family. (337 aa)
eef1a1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
vtcn1V-set domain-containing T cell activation inhibitor 1. (268 aa)
si:dkey-37o8.1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (483 aa)
crfb4Cytokine receptor family member b4. (313 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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