Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100334116 | braf | ENSDARP00000101310 | ENSDARP00000048390 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | B-Raf proto-oncogene, serine/threonine kinase. | 0.469 |
| LOC100334116 | cxcl12a | ENSDARP00000101310 | ENSDARP00000053945 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | 0.671 |
| LOC100334116 | cxcr4b | ENSDARP00000101310 | ENSDARP00000061498 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | 0.631 |
| braf | LOC100334116 | ENSDARP00000048390 | ENSDARP00000101310 | B-Raf proto-oncogene, serine/threonine kinase. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.469 |
| braf | hgfa | ENSDARP00000048390 | ENSDARP00000091725 | B-Raf proto-oncogene, serine/threonine kinase. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.449 |
| braf | pax3a | ENSDARP00000048390 | ENSDARP00000037761 | B-Raf proto-oncogene, serine/threonine kinase. | Transcription factor PAX3. | 0.412 |
| cxcl12a | LOC100334116 | ENSDARP00000053945 | ENSDARP00000101310 | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.671 |
| cxcl12a | cxcr4b | ENSDARP00000053945 | ENSDARP00000061498 | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | 0.999 |
| cxcl12a | hgfa | ENSDARP00000053945 | ENSDARP00000091725 | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.674 |
| cxcr4b | LOC100334116 | ENSDARP00000061498 | ENSDARP00000101310 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.631 |
| cxcr4b | cxcl12a | ENSDARP00000061498 | ENSDARP00000053945 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | 0.999 |
| cxcr4b | hgfa | ENSDARP00000061498 | ENSDARP00000091725 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.771 |
| cxcr4b | myf5 | ENSDARP00000061498 | ENSDARP00000109289 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Myogenic factor. | 0.403 |
| cxcr4b | myod1 | ENSDARP00000061498 | ENSDARP00000009713 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | 0.416 |
| cxcr4b | pax3a | ENSDARP00000061498 | ENSDARP00000037761 | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | Transcription factor PAX3. | 0.411 |
| hgfa | braf | ENSDARP00000091725 | ENSDARP00000048390 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | B-Raf proto-oncogene, serine/threonine kinase. | 0.449 |
| hgfa | cxcl12a | ENSDARP00000091725 | ENSDARP00000053945 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. | 0.674 |
| hgfa | cxcr4b | ENSDARP00000091725 | ENSDARP00000061498 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | 0.771 |
| myf5 | cxcr4b | ENSDARP00000109289 | ENSDARP00000061498 | Myogenic factor. | Chemokine (C-X-C motif), receptor 4b; Belongs to the G-protein coupled receptor 1 family. | 0.403 |
| myf5 | mylpfa | ENSDARP00000109289 | ENSDARP00000069948 | Myogenic factor. | Myosin light chain, phosphorylatable, fast skeletal muscle a. | 0.841 |
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