STRINGSTRING
lhfpl5b lhfpl5b myo7aa myo7aa pcdh15a pcdh15a tbc1d24 tbc1d24 col11a2 col11a2 TMC1 TMC1 mafb mafb ush1c ush1c cdh23 cdh23 mafa mafa cdh23-2 cdh23-2 tmie tmie
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lhfpl5bLHFPL tetraspan subfamily member 5b. (221 aa)
myo7aaMyosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2190 aa)
pcdh15aProtocadherin-related 15a. (1796 aa)
tbc1d24TBC1 domain family, member 24. (606 aa)
col11a2Collagen, type XI, alpha 2. (1803 aa)
TMC1Transmembrane channel-like protein 1; Probable ion channel required for the normal function of hair cells (By similarity). Component of the hair cell's mechanotransduction (MET) machinery ; Belongs to the TMC family. (990 aa)
mafbTranscription factor Maf; Acts as a transcriptional activator or repressor. Belongs to the bZIP family. Maf subfamily. (327 aa)
ush1cUsher syndrome 1C (Autosomal recessive, severe). (548 aa)
cdh23Cadherin-related 23. (2883 aa)
mafaV-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a); Belongs to the bZIP family. (325 aa)
cdh23-2Cadherin-related 23. (436 aa)
tmieTransmembrane inner ear. (231 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.