STRINGSTRING
pfn2l pfn2l gsnb gsnb scin scin gsna gsna cfl1 cfl1 cfl2 cfl2 cfl1l cfl1l scinla scinla X1WCU6_DANRE X1WCU6_DANRE lmod2b lmod2b pfn1 pfn1 ttn.1 ttn.1 vcla vcla lmod1b lmod1b vclb vclb pfn2 pfn2 lmod3 lmod3 scinlb scinlb acta1b acta1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pfn2lProfilin; Belongs to the profilin family. (139 aa)
gsnbGelsolin b. (728 aa)
scinScinderin. (733 aa)
gsnaGelsolin a. (729 aa)
cfl1Muscle cofilin 2; Belongs to the actin-binding proteins ADF family. (165 aa)
cfl2Cofilin 2 (Muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
cfl1lCofilin 1 (non-muscle),-like; Belongs to the actin-binding proteins ADF family. (163 aa)
scinlaScinderin-like a. (720 aa)
X1WCU6_DANREProfilin; Belongs to the profilin family. (127 aa)
lmod2bLeiomodin 2 (cardiac) b. (604 aa)
pfn1Profilin; Belongs to the profilin family. (141 aa)
ttn.1Titin, tandem duplicate 1. (29152 aa)
vclaVinculin a. (1131 aa)
lmod1bLeiomodin 1b (smooth muscle). (671 aa)
vclbVinculin b. (987 aa)
pfn2Profilin; Belongs to the profilin family. (140 aa)
lmod3Leiomodin-3; Essential for the organization of sarcomeric thin filaments in skeletal muscle; Belongs to the tropomodulin family. (670 aa)
scinlbScinderin-like b. (720 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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