STRINGSTRING
pcdh15b pcdh15b acta1b acta1b pvalb9 pvalb9 ush1c ush1c pcdh15a pcdh15a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pcdh15bProtocadherin-related 15b. (1907 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
pvalb9Parvalbumin 9; Belongs to the parvalbumin family. (109 aa)
ush1cUsher syndrome 1C (Autosomal recessive, severe). (548 aa)
pcdh15aProtocadherin-related 15a. (1796 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.