STRINGSTRING
shha shha ddb1 ddb1 spop spop ulk3 ulk3 mgrn1a mgrn1a sufu sufu dhcr7 dhcr7 notch1a notch1a cdk11b cdk11b ccnd1 ccnd1 gli2a gli2a mapkapk2b mapkapk2b tmpoa tmpoa ptch1 ptch1 mycn mycn tmpob tmpob kif7 kif7 her12 her12 smad3a smad3a notch1b notch1b tnpo1 tnpo1 hdac1 hdac1 shhb shhb zgc:92287 zgc:92287 gli3 gli3 olig2 olig2 tpra1 tpra1 ptch2 ptch2 gpr161 gpr161 sap18 sap18 plk1 plk1 ihha ihha ihhb ihhb stk36 stk36 cdon cdon map3k10 map3k10 sox2 sox2 dlg5a dlg5a brd4 brd4 atoh1a atoh1a mycbp mycbp dyrk3 dyrk3 csnk1a1 csnk1a1 iqce iqce gnas gnas cyp7a1 cyp7a1 kdm6bb kdm6bb bcl2a bcl2a efcab7 efcab7 dyrk2 dyrk2 hhat hhat ENSDARP00000125042 ENSDARP00000125042 usp8 usp8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
shhaSonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (418 aa)
ddb1Damage-specific DNA-binding protein 1. (1142 aa)
spopSpeckle-type POZ protein; Component of a cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex that mediates the ubiquitination of target proteins, leading most often to their proteasomal degradation. Belongs to the Tdpoz family. (374 aa)
ulk3Unc-51-like kinase 3. (407 aa)
mgrn1aProbable E3 ubiquitin-protein ligase MGRN1; E3 ubiquitin-protein ligase. Acts also as a negative regulator of hedgehog signaling. (529 aa)
sufuSuppressor of fused homolog. (485 aa)
dhcr77-dehydrocholesterol reductase; Production of cholesterol by reduction of C7-C8 double bond of 7-dehydrocholesterol (7-DHC). (478 aa)
notch1aNeurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] (2438 aa)
cdk11bCyclin-dependent kinase 11B. (800 aa)
ccnd1G1/S-specific cyclin-D1; May play a role in transcriptional regulation (By similarity). Essential for the control of the cell cycle at the G1/S (start) transition. (291 aa)
gli2aGLI family zinc finger 2a. (1439 aa)
mapkapk2bMAPK-activated protein kinase 2b; Belongs to the protein kinase superfamily. (397 aa)
tmpoaThymopoietin a. (685 aa)
ptch1Protein patched homolog 1. (1475 aa)
mycnN-myc protein; May function as a transcription factor. (503 aa)
tmpobThymopoietin b. (360 aa)
kif7Kinesin-like protein kif7; Acts downstream of smo as an intracellular repressor of hedgehog signaling pathway, mainly through the suppression of gli1 activity. This negative regulatory effect is enhanced in conjunction with the suppressor of fused (sufu) protein. Positively regulates gli2a activity by promoting its dissociation from sufu. Involved in the regulation of microtubular dynamics. (1363 aa)
her12BHLH transcription factor. (155 aa)
smad3aMothers against decapentaplegic homolog. (425 aa)
notch1bNotch receptor 1b. (2465 aa)
tnpo1Transportin 1. (891 aa)
hdac1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (480 aa)
shhbTiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. (416 aa)
zgc:92287Zgc:92287. (285 aa)
gli3GLI family zinc finger 3. (1553 aa)
olig2Oligodendrocyte lineage transcription factor 2. (273 aa)
tpra1Transmembrane protein adipocyte-associated 1 homolog. (378 aa)
ptch2Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. (1442 aa)
gpr161G-protein coupled receptor 161; Key negative regulator of Shh signaling during neural tube development. Recruited to primary cilia and acts as a regulator of the PKA-dependent basal repression machinery in Shh signaling by increasing cAMP levels, leading to promote the PKA-dependent processing of gli3 into gli3r and repress the Shh signaling. In presence of shh, it is removed from primary cilia, preventing its activity and allowing activation of the Shh signaling (By similarity). Required in left/right patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer vesicle; [...] (526 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
plk1Serine/threonine-protein kinase PLK. (595 aa)
ihhaHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
ihhbIndian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. (412 aa)
stk36Serine/threonine kinase 36 (fused homolog, Drosophila). (1231 aa)
cdonCell adhesion molecule-related/down-regulated by oncogenes. (1125 aa)
map3k10Mitogen-activated protein kinase kinase kinase. (1062 aa)
sox2Transcription factor Sox-2; Transcriptional activator. May function as a switch in neuronal development (By similarity). Downstream SRRT target that mediates the promotion of neural stem cell self-renewal (By similarity). (315 aa)
dlg5aDiscs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (1926 aa)
brd4Bromodomain-containing protein 4; Chromatin reader protein that recognizes and binds acetylated histones and plays a key role in transmission of epigenetic memory across cell divisions and transcription regulation. Remains associated with acetylated chromatin throughout the entire cell cycle and provides epigenetic memory for postmitotic G1 gene transcription by preserving acetylated chromatin status and maintaining high-order chromatin structure. During interphase, plays a key role in regulating the transcription of signal-inducible genes by associating with the P-TEFb complex and rec [...] (1444 aa)
atoh1aAtonal bHLH transcription factor 1a. (292 aa)
mycbpMYC-binding protein. (122 aa)
dyrk3Dual-specificity tyrosine phosphorylation-regulated kinase 3. (582 aa)
csnk1a1Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily. (365 aa)
iqceIQ motif-containing E. (680 aa)
gnasGNAS complex locus. (379 aa)
cyp7a1Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family. (512 aa)
kdm6bbLysine (K)-specific demethylase 6B, b. (1719 aa)
bcl2aB-cell leukemia/lymphoma 2. (228 aa)
efcab7EF-hand calcium-binding domain 7. (606 aa)
dyrk2Dual-specificity tyrosine-(Y)-phosphorylation-regulated kinase 2. (587 aa)
hhatHedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family. (508 aa)
ENSDARP00000125042Patched 1. (120 aa)
usp8Ubiquitin-specific peptidase 8; Belongs to the peptidase C19 family. (1067 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]