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gsr gsr casp8 casp8 tjp1a tjp1a Nox4 Nox4 stat4 stat4 vcam1b vcam1b mmel1 mmel1 pparg pparg hist2h3ca1 hist2h3ca1 ctsbb ctsbb nr1h3 nr1h3 ctnnb1 ctnnb1 gstp1 gstp1 lipeb lipeb gap43 gap43 faslg faslg nos1 nos1 gata4 gata4 ckba ckba ccn2b ccn2b abca1a abca1a E7FC63_DANRE E7FC63_DANRE esco1 esco1 zgc:162611-2 zgc:162611-2 tgfb1b tgfb1b bcl2a bcl2a lipea lipea cthl cthl trpa1a trpa1a stub1 stub1 cth cth tp53 tp53 trpv1 trpv1 insb insb Q5RHR2_DANRE Q5RHR2_DANRE caspbl caspbl stat5b stat5b slc6a3 slc6a3 cyp1b1 cyp1b1 nos2a nos2a tlr4ba tlr4ba cdh5 cdh5 lectin lectin mertka mertka psmb5 psmb5 tlr4al tlr4al il10 il10 tgfb5 tgfb5 stat1b stat1b esco2 esco2 casp3a casp3a apaf1 apaf1 parp1 parp1 tnfb tnfb bdnf bdnf ckmt1 ckmt1 chuk chuk cyba cyba stat1a stat1a gclc gclc rhoab rhoab stat5a stat5a ckbb ckbb psmb6 psmb6 stat3 stat3 mapk3 mapk3 sesn2 sesn2 ckmt2a ckmt2a mstnb mstnb h3f3a-2 h3f3a-2 lipg lipg sirt1 sirt1 zgc:113983 zgc:113983 foxp3a foxp3a acaca acaca mif mif serpine1 serpine1 ptenb ptenb ctsba ctsba casp3b casp3b pcna pcna gsk3bb gsk3bb zgc:173552 zgc:173552 cd8a cd8a jun jun ccn2a ccn2a nfe2l2a nfe2l2a mmp9 mmp9 apoba apoba sod2 sod2 selp selp tgfb1a tgfb1a ckmb ckmb cldn1 cldn1 ckmt2b ckmt2b hdac3 hdac3 ache ache cebpa cebpa hdac1 hdac1 ins ins cd36 cd36 stat2 stat2 nos2b nos2b tgfb3 tgfb3 stat6 stat6 gsk3ba gsk3ba tlr4bb tlr4bb caspa caspa ahr1b ahr1b ckma ckma hmox1a hmox1a mb mb th th fosab fosab mpx mpx casp9 casp9
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gsrGlutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (425 aa)
casp8Caspase 8, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (476 aa)
tjp1aTight junction protein 1a; Belongs to the MAGUK family. (1689 aa)
Nox4NADPH oxidase 4. (246 aa)
stat4Signal transducer and activator of transcription. (741 aa)
vcam1bVascular cell adhesion molecule 1b. (808 aa)
mmel1Membrane metallo-endopeptidase-like 1. (765 aa)
ppargPeroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (116 aa)
hist2h3ca1Histone H3; Belongs to the histone H3 family. (136 aa)
ctsbbCathepsin Bb; Belongs to the peptidase C1 family. (327 aa)
nr1h3Nuclear receptor subfamily 1, group H, member 3. (441 aa)
ctnnb1Catenin beta-1; Key downstream component of the canonical Wnt signaling pathway (By similarity). In the absence of Wnt, forms a complex with axin1, axin2, apc, csnk1a1 and gsk3b that promotes phosphorylation on N-terminal Ser and Thr residues and ubiquitination of ctnnb1 and its subsequent degradation by the proteasome (By similarity). In the presence of Wnt ligand, ctnnb1 is not ubiquitinated and accumulates in the nucleus, where it acts as a coactivator for transcription factors of the TCF/LEF family, leading to activate Wnt responsive genes (By similarity). Plays a key role in dorso [...] (789 aa)
gstp1Pi-class glutathione S-transferase; Belongs to the GST superfamily. (208 aa)
lipebLipase, hormone-sensitive b. (872 aa)
gap43Growth-associated protein 43. (194 aa)
faslgFas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (268 aa)
nos1Nitric oxide synthase; Produces nitric oxide (NO). (1431 aa)
gata4GATA-binding protein 4. (352 aa)
ckbaCreatine kinase, brain a; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
ccn2bConnective tissue growth factor-like protein. (351 aa)
abca1aATP-binding cassette, sub-family A (ABC1), member 1A. (2268 aa)
E7FC63_DANREAdenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1183 aa)
esco1Establishment of sister chromatid cohesion N-acetyltransferase 1. (931 aa)
zgc:162611-2Si:dkey-108k21.24. (151 aa)
tgfb1bTransforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
bcl2aB-cell leukemia/lymphoma 2. (228 aa)
lipeaLipase, hormone-sensitive a. (696 aa)
cthlCystathionase (cystathionine gamma-lyase),-like. (404 aa)
trpa1aTransient receptor potential cation channel, subfamily A, member 1a. (1126 aa)
stub1STIP1 homology and U-Box-containing protein 1. (287 aa)
cthCystathionase (cystathionine gamma-lyase). (404 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. (369 aa)
trpv1Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family. (813 aa)
insbInsulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (159 aa)
Q5RHR2_DANREAdenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1187 aa)
caspblCaspase b,-like; Belongs to the peptidase C14A family. (409 aa)
stat5bSignal transducer and activator of transcription. (786 aa)
slc6a3Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (629 aa)
cyp1b1Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (526 aa)
nos2aNitric oxide synthase; Produces nitric oxide (NO). (1079 aa)
tlr4baToll-like receptor 4b, duplicate a. (787 aa)
cdh5Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (767 aa)
lectinLectin. (152 aa)
mertkaC-mer proto-oncogene tyrosine kinase a. (952 aa)
psmb5Proteasome subunit beta. (269 aa)
tlr4alToll-like receptor 4a, like. (816 aa)
il10Interleukin-10. (180 aa)
tgfb5Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
stat1bSignal transducer and activator of transcription. (725 aa)
esco2N-acetyltransferase ESCO2; Acetyltransferase required for the establishment of sister chromatid cohesion. Couples the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together (By similarity). Essential for early development. (609 aa)
casp3aCaspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (282 aa)
apaf1Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP (By similarity). (1261 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1013 aa)
tnfbTumor necrosis factor b (TNF superfamily, member 2). (242 aa)
bdnfBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (270 aa)
ckmt1Creatine kinase, mitochondrial 1; Belongs to the ATP:guanido phosphotransferase family. (417 aa)
chukInhibitor of nuclear factor kappa-B kinase subunit alpha; Phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. Phosphorylates 'Ser-10' of histone H3 at NF-kappa-B-regulated promoters during inflammatory responses triggered by cytokines; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. I-kappa-B kinase subfamily. (758 aa)
cybaCytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (185 aa)
stat1aSignal transducer and activator of transcription. (749 aa)
gclcGlutamate-cysteine ligase, catalytic subunit. (631 aa)
rhoabRho-related GTP-binding protein RhoA-B; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. (193 aa)
stat5aSignal transducer and activator of transcription. (785 aa)
ckbbBrain-subtype creatine kinase; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
psmb6Proteasome subunit beta. (232 aa)
stat3Signal transducer and activator of transcription. (806 aa)
mapk3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (392 aa)
sesn2Sestrin 2. (444 aa)
ckmt2aCreatine kinase, mitochondrial 2a (sarcomeric); Belongs to the ATP:guanido phosphotransferase family. (417 aa)
mstnbGrowth/differentiation factor 8; Acts specifically as a negative regulator of skeletal muscle growth. May down-regulate muscle-specific transcription factors such as myod and myog. (374 aa)
h3f3a-2Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...] (136 aa)
lipgLipase, endothelial. (500 aa)
sirt1Sirtuin 1. (710 aa)
zgc:113983Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
foxp3aForkhead box protein. (419 aa)
acacaAcetyl-CoA carboxylase alpha. (2390 aa)
mifMacrophage migration inhibitory factor. (115 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (392 aa)
ptenbPhosphatase and tensin homolog B; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (422 aa)
ctsbaCathepsin B, a; Belongs to the peptidase C1 family. (330 aa)
casp3bCaspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (285 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
gsk3bbGlycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (419 aa)
zgc:173552Histone H3; Belongs to the histone H3 family. (136 aa)
cd8aCD8 antigen, alpha polypeptide. (216 aa)
junJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (308 aa)
ccn2aNovel protein similar to vertebrate connective tissue growth factor (CTGF). (345 aa)
nfe2l2aNuclear factor (Erythroid-derived 2)-like 2. (586 aa)
mmp9Matrix metallopeptidase 9. (680 aa)
apobaApolipoprotein Ba. (4418 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (224 aa)
selpSelectin P. (868 aa)
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
ckmbCreatine kinase, muscle b; Belongs to the ATP:guanido phosphotransferase family. (380 aa)
cldn1Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (210 aa)
ckmt2bCreatine kinase, mitochondrial 2b (sarcomeric); Belongs to the ATP:guanido phosphotransferase family. (413 aa)
hdac3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (By similarity). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). Histone deacetylases act via the formation of large multiprotein complexes (By similarity). May play a role in the regulation of the circadian clock in a deacetylase activity-independent manner (By similarity). (428 aa)
acheAcetylcholinesterase; Terminates signal transduction at the neuromuscular junction by rapid hydrolysis of the acetylcholine released into the synaptic cleft. (634 aa)
cebpaCCAAT/enhancer-binding protein. (288 aa)
hdac1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (480 aa)
insInsulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (108 aa)
cd36CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. (465 aa)
stat2Signal transducer and activator of transcription. (836 aa)
nos2bNitric oxide synthase; Produces nitric oxide (NO). (1077 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (410 aa)
stat6Signal transducer and activator of transcription. (758 aa)
gsk3baGlycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
tlr4bbToll-like receptor 4b, duplicate b. (819 aa)
caspaCaspase a subunit p10; Thiol protease which cleaves IL-1 beta (il1b), releasing the mature cytokine which is involved in a variety of inflammatory processes, and mediates apoptosis. Component of the NLRP1 inflammasome, which plays a crucial role in innate immunity and inflammation. In response to pathogens and other damage-associated signals, recruited to the NLRP1 inflammasome in its precursor form. Its subsequent activation causes the cleavage of pro-il1b into the midformed il1b, which then evetually leads to il1b maturation and secretion in the extracellular milieu. Required for the [...] (383 aa)
ahr1bAryl hydrocarbon receptor 1B. (940 aa)
ckmaCreatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
hmox1aHeme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. (272 aa)
mbMyoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (147 aa)
thTyrosine hydroxylase. (489 aa)
fosabV-fos FBJ murine osteosarcoma viral oncogene homolog Ab. (349 aa)
mpxMyeloid-specific peroxidase. (893 aa)
casp9Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (436 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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