STRINGSTRING
ada ada stat1b stat1b vcam1b vcam1b il1b il1b nos1 nos1 itgam itgam loxa loxa nos2a nos2a il10 il10 il17a/f2 il17a/f2 il17a/f1 il17a/f1 mmp9 mmp9 il17a/f3 il17a/f3 nos2b nos2b mpx mpx stat1a stat1a tnfb tnfb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
adaAdenosine deaminase; Catalyzes the hydrolytic deamination of adenosine and 2- deoxyadenosine. Plays an important role in purine metabolism and in adenosine homeostasis. Modulates signaling by extracellular adenosine, and so contributes indirectly to cellular signaling events. May act as a positive regulator of T-cell coactivation (By similarity). Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. (362 aa)
stat1bSignal transducer and activator of transcription. (725 aa)
vcam1bVascular cell adhesion molecule 1b. (808 aa)
il1bInterleukin-1. (284 aa)
nos1Nitric oxide synthase; Produces nitric oxide (NO). (1431 aa)
itgamIntegrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family. (780 aa)
loxaLysyl oxidase a. (408 aa)
nos2aNitric oxide synthase; Produces nitric oxide (NO). (1079 aa)
il10Interleukin-10. (180 aa)
il17a/f2Interleukin 17a/f2. (140 aa)
il17a/f1Interleukin 17a/f1. (153 aa)
mmp9Matrix metallopeptidase 9. (680 aa)
il17a/f3Interleukin 17a/f3. (162 aa)
nos2bNitric oxide synthase; Produces nitric oxide (NO). (1077 aa)
mpxMyeloid-specific peroxidase. (893 aa)
stat1aSignal transducer and activator of transcription. (749 aa)
tnfbTumor necrosis factor b (TNF superfamily, member 2). (242 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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