STRINGSTRING
LOC562139 LOC562139 prkacab prkacab prkacaa prkacaa tgfb2 tgfb2 tyr tyr dyrk1aa dyrk1aa prkacbb prkacbb tyrp1b tyrp1b opn3 opn3 jun jun zgc:112160 zgc:112160 tyrp1a tyrp1a ctrb1 ctrb1 prkacba prkacba mc1r mc1r
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC562139Similar to chymotrypsinogen B1; Belongs to the peptidase S1 family. (263 aa)
prkacabProtein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (351 aa)
prkacaaProtein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (352 aa)
tgfb2Transforming growth factor, beta 2. (413 aa)
tyrTyrosinase. (535 aa)
dyrk1aaDual-specificity tyrosine-(Y)-phosphorylation-regulated kinase 1A, a. (737 aa)
prkacbbProtein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily. (351 aa)
tyrp1bTyrosinase-related protein 1b. (526 aa)
opn3Teleost encephalopsin/panopsin. (387 aa)
junJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (308 aa)
zgc:112160Zgc:112160; Belongs to the peptidase S1 family. (265 aa)
tyrp1aTyrosinase-related protein 1a. (524 aa)
ctrb1Chymotrypsinogen B1; Belongs to the peptidase S1 family. (263 aa)
prkacbaProtein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily. (395 aa)
mc1rMelanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. (323 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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