STRINGSTRING
LOC557301 LOC557301 havcr2 havcr2 mhc2b mhc2b ENSDARP00000137499 ENSDARP00000137499 tnfrsf9b tnfrsf9b ca9 ca9 mslna mslna cd247 cd247 tgfb1b tgfb1b ccl19b ccl19b tgfb3 tgfb3 kdr kdr il10 il10 tgfb5 tgfb5 stat3 stat3 mhc2bl mhc2bl LOC563933 LOC563933 cxcr2 cxcr2 cd22 cd22 egf egf tgfb1a tgfb1a cxcl12a cxcl12a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC557301Cocaine- and amphetamine-regulated transcript 3. (119 aa)
havcr2Hepatitis A virus cellular receptor 2. (231 aa)
mhc2bMajor histocompatibility complex class II integral membrane beta chain gene. (252 aa)
ENSDARP00000137499Si:dkey-33b17.3. (277 aa)
tnfrsf9bTumor necrosis factor receptor superfamily, member 9b. (281 aa)
ca9Carbonic anhydrase IX. (395 aa)
mslnaMesothelin a. (1638 aa)
cd247CD247 molecule. (120 aa)
tgfb1bTransforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
ccl19bChemokine (C-C motif) ligand 19b. (128 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (410 aa)
kdrVascular endothelial growth factor receptor 2; Receptor for VEGF or VEGFC. Has a tyrosine-protein kinase activity. Combinations of multiple VEGF receptors are required for development of different blood vessel types in the embryo. Involved in angiogenesis, specifically in VEGF-induced sprouting of new blood vessels. Particularly involved in artery formation. Does not appear to be required for hematopoiesis. (1357 aa)
il10Interleukin-10. (180 aa)
tgfb5Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
stat3Signal transducer and activator of transcription. (806 aa)
mhc2blMHC class II beta chain-like. (250 aa)
LOC563933Serine protease; Belongs to the peptidase S1B family. (374 aa)
cxcr2Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family. (340 aa)
cd22Cd22 molecule. (417 aa)
egfEpidermal growth factor. (1114 aa)
tgfb1aTransforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
cxcl12aChemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. (99 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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