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aldh3a2b aldh3a2b aldh3b2 aldh3b2 aldh3a1 aldh3a1 col5a3a col5a3a col22a1 col22a1 col11a2 col11a2 col9a1b col9a1b mpv17 mpv17 foxd3 foxd3 rars1 rars1 sp3a sp3a col11a1a col11a1a aldh3b1 aldh3b1 aldh3a2a aldh3a2a col9a2 col9a2 pitx2 pitx2 col9a3 col9a3 mitfa mitfa aldh1a2 aldh1a2 col2a1a col2a1a sox10 sox10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
aldh3a2bAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (490 aa)
aldh3b2Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (502 aa)
aldh3a1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)
col5a3aCollagen, type V, alpha 3a. (1887 aa)
col22a1Collagen, type XXII, alpha 1. (1622 aa)
col11a2Collagen, type XI, alpha 2. (1803 aa)
col9a1bCollagen, type IX, alpha 1b. (681 aa)
mpv17Protein Mpv17; Involved in mitochondrial homeostasis, and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance. Non-selective channel that modulates the membrane potential under normal conditions and oxidative stress (By similarity). Belongs to the peroxisomal membrane protein PXMP2/4 family. (177 aa)
foxd3Forkhead box D3. (371 aa)
rars1Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (661 aa)
sp3aSp3a transcription factor. (679 aa)
col11a1aCollagen, type XI, alpha 1a. (1813 aa)
aldh3b1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (473 aa)
aldh3a2aAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)
col9a2Procollagen, type IX, alpha 2. (691 aa)
pitx2Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. (314 aa)
col9a3Collagen, type IX, alpha 3. (679 aa)
mitfaMicrophthalmia-associated transcription factor a. (412 aa)
aldh1a2Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family. (518 aa)
col2a1aCollagen, type II, alpha 1a. (1491 aa)
sox10HMG-box transcription factor Sox10. (485 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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