STRINGSTRING
wasb wasb cc2d2a cc2d2a rab3ip rab3ip spice1 spice1 mcidas mcidas ift20 ift20 kifc1 kifc1 dync1h1 dync1h1 mapk15 mapk15 cnn1b cnn1b foxj1a foxj1a sufu sufu kif3b kif3b cep192 cep192 talpid3 talpid3 cnn3a cnn3a X1WET7_DANRE X1WET7_DANRE rab8a rab8a shha shha ENSDARP00000125042 ENSDARP00000125042 cep290 cep290 ahi1 ahi1 myo5aa myo5aa efcab7 efcab7 cul1b cul1b macf1a macf1a snap29 snap29 cep104 cep104 cep120 cep120 iqce iqce nphp4 nphp4 kif17 kif17 kif3a kif3a ace2 ace2 nedd9 nedd9 cep70 cep70 bbs1 bbs1 fam92a1 fam92a1 neurl4 neurl4 rilp rilp arl13b arl13b wdr35 wdr35 rab8b rab8b eps15 eps15 ppm1h ppm1h ttc23 ttc23 ift46 ift46 plk1 plk1 cep63 cep63 ptch2 ptch2 rab10 rab10 crocc2 crocc2 gli3 gli3 acta1b acta1b cnn3b cnn3b shhb shhb cnn2 cnn2 plk4 plk4 rab35b rab35b stil stil cep135 cep135 ttc26 ttc26 rilpl2 rilpl2 ift74 ift74 ptch1 ptch1 noto noto nek2 nek2 ehd1b ehd1b ift81 ift81 skp1 skp1 usp33 usp33 isl1 isl1 ift22 ift22 gli2a gli2a calm2a calm2a wasa wasa txndc15 txndc15 cnn1a cnn1a ofd1 ofd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wasbWASP actin nucleation-promoting factor b. (479 aa)
cc2d2aCoiled-coil and C2 domain-containing 2A. (1675 aa)
rab3ipRAB3A-interacting protein (rabin3). (436 aa)
spice1Spindle and centriole-associated protein 1. (724 aa)
mcidasUncharacterized protein. (302 aa)
ift20Intraflagellar transport protein 20 homolog; Involved in ciliary process assembly. May play a role in the trafficking of ciliary membrane proteins from the Golgi complex to the cilium. Regulates the platelet-derived growth factor receptor-alpha (PDGFRA) signaling pathway. Plays an important role in spermatogenesis, particularly spermiogenesis, when germ cells form flagella. (132 aa)
kifc1Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (618 aa)
dync1h1Dynein, cytoplasmic 1, heavy chain 1. (1765 aa)
mapk15Mitogen-activated protein kinase. (523 aa)
cnn1bCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (296 aa)
foxj1aForkhead box protein J1-A; Key transcription factor required for motile ciliogenesis. Activates genes essential for motile cilia formation and function. Its activity is sufficient for ectopic development of cilia that resemble motile cilia. (458 aa)
sufuSuppressor of fused homolog. (485 aa)
kif3bKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (775 aa)
cep192Centrosomal protein 192. (2582 aa)
talpid3Protein TALPID3; Required for ciliogenesis and sonic hedgehog/SHH signaling. Belongs to the TALPID3 family. (1548 aa)
cnn3aCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (329 aa)
X1WET7_DANRESi:ch211-66i15.4. (197 aa)
rab8aRAB8A, member RAS oncogene family. (207 aa)
shhaSonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). (418 aa)
ENSDARP00000125042Patched 1. (120 aa)
cep290Centrosomal protein of 290 kDa; Involved in early and late steps in cilia formation. May play a role in early ciliogenesis in the disappearance of centriolar satellites and in the transition of primary ciliar vesicles (PCVs) to capped ciliary vesicles (CCVs). In the ciliary transition zone is part of the tectonic-like complex which is required for tissue-specific ciliogenesis and may regulate ciliary membrane composition. Involved in regulation of the BBSome complex integrity and in ciliary targeting of selected BBSome cargos. Required for the correct localization of ciliary and photot [...] (2439 aa)
ahi1Abelson helper integration site 1. (1193 aa)
myo5aaMyosin VAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1890 aa)
efcab7EF-hand calcium-binding domain 7. (606 aa)
cul1bCullin 1b; Belongs to the cullin family. (775 aa)
macf1aMicrotubule actin crosslinking factor 1a. (5754 aa)
snap29Synaptosome-associated protein 29. (232 aa)
cep104Centrosomal protein 104. (978 aa)
cep120Centrosomal protein 120. (929 aa)
iqceIQ motif-containing E. (680 aa)
nphp4Si:dkey-202c5.1 protein. (189 aa)
kif17Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (823 aa)
kif3aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (701 aa)
ace2Angiotensin-converting enzyme. (818 aa)
nedd9Neural precursor cell-expressed, developmentally down-regulated 9. (783 aa)
cep70Centrosomal protein 70. (609 aa)
bbs1Bardet-Biedl syndrome 1. (588 aa)
fam92a1Protein FAM92A; Acts as a positive regulator of ciliary hedgehog signaling (By similarity). Plays a role in ciliogenesis (By similarity). (295 aa)
neurl4Neuralized E3 ubiquitin protein ligase 4. (1588 aa)
rilpRab-interacting lysosomal protein. (441 aa)
arl13bADP-ribosylation factor-like protein 13B; Cilium-specific protein required to control the microtubule- based, ciliary axoneme structure. May act by maintaining the association between IFT subcomplexes A and B. Binds GTP but is not able to hydrolyze it; the GTPase activity remains unclear. Required to pattern the neural tube. Involved in cerebral cortex development: required for the initial formation of a polarized radial glial scaffold, the first step in the construction of the cerebral cortex, by regulating ciliary signaling. Regulates the migration and placement of postmitotic intern [...] (407 aa)
wdr35WD repeat-containing protein 35. (1203 aa)
rab8bRAB8B, member RAS oncogene family. (209 aa)
eps15Epidermal growth factor receptor pathway substrate 15. (1039 aa)
ppm1hProtein phosphatase 1H. (516 aa)
ttc23Tetratricopeptide repeat domain 23. (463 aa)
ift46Intraflagellar transport protein 46 homolog; Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in early embryonic development; Belongs to the IFT46 family. (355 aa)
plk1Serine/threonine-protein kinase PLK. (595 aa)
cep63Centrosomal protein of 63 kDa; Required for normal spindle assembly. Plays a key role in mother-centriole-dependent centriole duplication. Plays a role in DNA damage response. Following DNA damage, such as double-strand breaks (DSBs), is removed from centrosomes; this leads to the inactivation of spindle assembly and delay in mitotic progression (By similarity). (689 aa)
ptch2Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. (1442 aa)
rab10RAB10, member RAS oncogene family. (201 aa)
crocc2Ciliary rootlet coiled-coil, rootletin family member 2. (1959 aa)
gli3GLI family zinc finger 3. (1553 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
cnn3bCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (331 aa)
shhbTiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. (416 aa)
cnn2Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (307 aa)
plk4Serine/threonine-protein kinase PLK4; Serine/threonine-protein kinase that plays a central role in centriole duplication. Able to trigger procentriole formation on the surface of the parental centriole cylinder, leading to the recruitment of centriole biogenesis proteins such as sass6, cenpj/cpap, ccp110, cep135 and gamma-tubulin. When overexpressed, it is able to induce centrosome amplification through the simultaneous generation of multiple procentrioles adjoining each parental centriole during S phase. Its central role in centriole replication suggests a possible role in tumorigenes [...] (941 aa)
rab35bRAB35, member RAS oncogene family b. (201 aa)
stilSCL-interrupting locus protein homolog; Plays an essential role in early embryonic development. Plays an important role in the regulation of centriole duplication (By similarity). (1263 aa)
cep135Centrosomal protein of 135 kDa; Centrosomal protein involved in centriole biogenesis. Acts as a scaffolding protein during early centriole biogenesis. Required for the targeting of centriole satellite proteins to centrosomes. Also required for centriole-centriole cohesion during interphase by acting as a platform protein for cep250 at the centriole (By similarity). Belongs to the CEP135/TSGA10 family. (1164 aa)
ttc26Intraflagellar transport protein 56; Component of the intraflagellar transport (IFT) complex B required for transport of proteins in the motile cilium. Required for transport of specific ciliary cargo proteins related to motility, while it is neither required for IFT complex B assembly or motion nor for cilium assembly. Plays a key role in maintaining the integrity of the IFT complex B and the proper ciliary localization of the IFT complex B components. Essential for maintaining proper microtubule organization within the ciliary axoneme (By similarity). Belongs to the IFT56 family. (557 aa)
rilpl2RILP-like protein 2; Involved in cell shape and neuronal morphogenesis, positively regulating the establishment and maintenance of dendritic spines. Plays a role in cellular protein transport (By similarity); Belongs to the RILPL family. (195 aa)
ift74Intraflagellar transport 74. (583 aa)
ptch1Protein patched homolog 1. (1475 aa)
notoNotochord homeobox. (241 aa)
nek2NIMA (Never in mitosis gene a)-related kinase 2. (440 aa)
ehd1bEH-domain-containing 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (532 aa)
ift81Intraflagellar transport 81 homolog. (675 aa)
skp1S-phase kinase-associated protein 1A; Belongs to the SKP1 family. (163 aa)
usp33Ubiquitin carboxyl-terminal hydrolase 33; Deubiquitinating enzyme involved in various processes such as centrosome duplication, cellular migration and beta-2 adrenergic receptor/ADRB2 recycling. Involved in regulation of centrosome duplication by mediating deubiquitination of ccp110 in S and G2/M phase, leading to stabilize ccp110 during the period which centrioles duplicate and elongate. Involved in cell migration via its interaction with intracellular domain of robo1, leading to regulate the Slit signaling. Plays a role in commissural axon guidance cross the ventral midline of the ne [...] (897 aa)
isl1Insulin gene enhancer protein isl-1; DNA-binding transcriptional activator. Recognizes and binds to the consensus octamer binding site 5'-ATAATTAA-3' in promoter of target genes. Plays a fundamental role in the gene regulatory network essential for retinal ganglion cell (RGC) differentiation. May be involved in subtype specialization of primary motoneurons. May bind to insulin gene enhancer sequences. Essential for heart development (By similarity). (349 aa)
ift22Intraflagellar transport protein 22 homolog; Belongs to the small GTPase superfamily. Rab family. (187 aa)
gli2aGLI family zinc finger 2a. (1439 aa)
calm2aCalmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. (149 aa)
wasaWASP actin nucleation-promoting factor a. (630 aa)
txndc15Interferon regulatory factor 1b. (286 aa)
cnn1aCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (287 aa)
ofd1Oral-facial-digital syndrome 1 protein homolog; Component of the centrioles controlling mother and daughter centrioles length. Involved in the biogenesis of the cilium, a centriole-associated function. The cilium is a cell surface projection found in many vertebrate cells required to transduce signals important for development and tissue homeostasis. Plays an important role in development by regulating Wnt signaling and the specification of the left-right axis; Belongs to the OFD1 family. (902 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (38%) [HD]