STRINGSTRING
elf1 elf1 actn3b actn3b dmd dmd cnn1a cnn1a actn3a actn3a plek2 plek2 tcap tcap nebl nebl xirp1 xirp1 cnn2 cnn2 cnn3b cnn3b acta1b acta1b cx43 cx43 obscna obscna vdac1 vdac1 srfa srfa pleca pleca src src fn1b fn1b myot myot wu:fi04e12 wu:fi04e12 ncoa2 ncoa2 ttn.1 ttn.1 neb neb ptbp3 ptbp3 actn1 actn1 palld palld cx40.8 cx40.8 plek plek cnn3a cnn3a cnn1b cnn1b utrn utrn csrp3 csrp3 FLNB FLNB obscnb obscnb Mypn Mypn actn4 actn4 plecb plecb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
elf1E74-like ETS transcription factor 1. (639 aa)
actn3bActinin alpha 3b. (898 aa)
dmdDystrophin. (594 aa)
cnn1aCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (287 aa)
actn3aActinin alpha 3a. (896 aa)
plek2Plek2 protein. (361 aa)
tcapTitin-cap (telethonin). (179 aa)
neblNebulette. (276 aa)
xirp1Xin actin-binding repeat-containing protein 1; Protects actin filaments from depolymerization. Belongs to the Xin family. (2297 aa)
cnn2Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (307 aa)
cnn3bCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (331 aa)
acta1bActin alpha 1, skeletal muscle b. (377 aa)
cx43Gap junction alpha-1 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Plays an essential role in gap junction communication in the ventricles (By similarity); Belongs to the connexin family. Alpha-type (group II) subfamily. (381 aa)
obscnaObscurin, cytoskeletal calmodulin and titin-interacting RhoGEF a. (1992 aa)
vdac1Voltage-dependent anion channel 1. (283 aa)
srfaSerum response factor a. (539 aa)
plecaPlectin a. (4577 aa)
srcProto-oncogene tyrosine-protein kinase Src; Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G protein-coupled receptors as well as cytokine receptors. Participates in signaling pathways that control a diverse spectrum of biological activities including gene transcription, immune response, cell adhesion, cell cycle progression, apoptosis, migration, and transformation. Due to functional redundancy bet [...] (534 aa)
fn1bFibronectin 1b. (2500 aa)
myotMyotilin. (561 aa)
wu:fi04e12Wu:fi04e12. (2207 aa)
ncoa2Nuclear receptor coactivator 2; Transcriptional coactivator for steroid receptors and nuclear receptors. Coactivator of the steroid binding domain (AF-2) but not of the modulating N-terminal domain (AF-1) (By similarity). Has a role in primitive myelopoiesis in the differentiation of granulocytes and macrophages. May play a role in the positive regulation of the circadian clock (By similarity). (1505 aa)
ttn.1Titin, tandem duplicate 1. (29152 aa)
nebNebulin. (6177 aa)
ptbp3Polypyrimidine tract-binding protein 3. (522 aa)
actn1Actinin, alpha 1. (902 aa)
palldPalladin, cytoskeletal-associated protein. (1401 aa)
cx40.8Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (354 aa)
plekPleckstrin. (352 aa)
cnn3aCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (329 aa)
cnn1bCalponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (296 aa)
utrnUtrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. (2632 aa)
csrp3Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)
FLNBFilamin B. (1992 aa)
obscnbObscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b. (1660 aa)
MypnUncharacterized protein. (663 aa)
actn4Actinin, alpha 4. (923 aa)
plecbPlectin b. (4535 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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