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pgk1 pgk1 gpia gpia tnni2a.4 tnni2a.4 tnnt2c tnnt2c gapdh gapdh mylpfa mylpfa tnnc2 tnnc2 tnnt2a tnnt2a gpib gpib ldha ldha tnnt1 tnnt1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pgk1Phosphoglycerate kinase. (417 aa)
gpiaGlucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
tnni2a.4Troponin I type 2a (skeletal, fast), tandem duplicate 4. (176 aa)
tnnt2cTroponin T1, skeletal, slow. (290 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are proba [...] (333 aa)
mylpfaMyosin light chain, phosphorylatable, fast skeletal muscle a. (169 aa)
tnnc2Fast skeletal muscle troponin C. (160 aa)
tnnt2aTroponin T type 2a (cardiac). (282 aa)
gpibGlucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
ldhaL-lactate dehydrogenase A chain; Belongs to the LDH/MDH superfamily. LDH family. (333 aa)
tnnt1Troponin T type 1 (skeletal, slow). (342 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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