STRINGSTRING
stat3 stat3 hif1ab hif1ab il1b il1b nos1 nos1 aplnr2 aplnr2 hif1al hif1al txnipb txnipb trpv1 trpv1 caspbl caspbl aplnrb aplnrb nos2a nos2a tlr4ba tlr4ba tlr4al tlr4al ptprc ptprc TMC1 TMC1 lmo4a lmo4a oct2 oct2 cxcr2 cxcr2 aplnra aplnra sod2 sod2 cx43 cx43 txnipa txnipa nos2b nos2b gsr gsr hif1aa hif1aa caspa caspa tlr4bb tlr4bb stat6 stat6 stat1a stat1a tnfb tnfb stat1b stat1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stat3Signal transducer and activator of transcription. (806 aa)
hif1abHypoxia-inducible factor 1 subunit alpha b. (777 aa)
il1bInterleukin-1. (284 aa)
nos1Nitric oxide synthase; Produces nitric oxide (NO). (1431 aa)
aplnr2Apelin receptor 2; Belongs to the G-protein coupled receptor 1 family. (408 aa)
hif1alHypoxia-inducible factor 1 subunit alpha,-like. (626 aa)
txnipbThioredoxin-interacting protein b. (379 aa)
trpv1Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family. (813 aa)
caspblCaspase b,-like; Belongs to the peptidase C14A family. (409 aa)
aplnrbApelin receptor B; Receptor for apelin receptor early endogenous ligand (apela) and apelin (apln) hormones coupled to G proteins that inhibit adenylate cyclase activity. Plays a key role in early development such as gastrulation, blood vessels formation and heart morphogenesis by acting as a receptor for apela hormone, promoting endoderm and mesendoderm cell migration and regulating the migration of cells fated to become myocardial progenitors, respectively. Positively regulates angioblast migration toward the embryonic midline, i.e. the position of the future vessel formation, during [...] (359 aa)
nos2aNitric oxide synthase; Produces nitric oxide (NO). (1079 aa)
tlr4baToll-like receptor 4b, duplicate a. (787 aa)
tlr4alToll-like receptor 4a, like. (816 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1130 aa)
TMC1Transmembrane channel-like protein 1; Probable ion channel required for the normal function of hair cells (By similarity). Component of the hair cell's mechanotransduction (MET) machinery ; Belongs to the TMC family. (990 aa)
lmo4aLIM domain only 4a. (167 aa)
oct2Organic cation transporter 2. (554 aa)
cxcr2Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family. (340 aa)
aplnraApelin receptor A; Receptor for apelin receptor early endogenous ligand (apela) and apelin (apln) hormones coupled to G proteins that inhibit adenylate cyclase activity. Plays a key role in early development such as gastrulation, blood vessels formation and heart morphogenesis by acting as a receptor for apela hormone, promoting endoderm and mesendoderm cell migration and regulating the migration of cells fated to become myocardial progenitors, respectively. Positively regulates angioblast migration toward the embryonic midline, i.e. the position of the future vessel formation, during [...] (362 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (224 aa)
cx43Gap junction alpha-1 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Plays an essential role in gap junction communication in the ventricles (By similarity); Belongs to the connexin family. Alpha-type (group II) subfamily. (381 aa)
txnipaThioredoxin-interacting protein a. (400 aa)
nos2bNitric oxide synthase; Produces nitric oxide (NO). (1077 aa)
gsrGlutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (425 aa)
hif1aaHypoxia-inducible factor 1 subunit alpha a. (717 aa)
caspaCaspase a subunit p10; Thiol protease which cleaves IL-1 beta (il1b), releasing the mature cytokine which is involved in a variety of inflammatory processes, and mediates apoptosis. Component of the NLRP1 inflammasome, which plays a crucial role in innate immunity and inflammation. In response to pathogens and other damage-associated signals, recruited to the NLRP1 inflammasome in its precursor form. Its subsequent activation causes the cleavage of pro-il1b into the midformed il1b, which then evetually leads to il1b maturation and secretion in the extracellular milieu. Required for the [...] (383 aa)
tlr4bbToll-like receptor 4b, duplicate b. (819 aa)
stat6Signal transducer and activator of transcription. (758 aa)
stat1aSignal transducer and activator of transcription. (749 aa)
tnfbTumor necrosis factor b (TNF superfamily, member 2). (242 aa)
stat1bSignal transducer and activator of transcription. (725 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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