STRINGSTRING
E7EY00_DANRE E7EY00_DANRE rab23 rab23 rab2a rab2a rab5b rab5b zgc:171927 zgc:171927 zgc:101559 zgc:101559 rab22a rab22a rab5ab rab5ab rab4a rab4a rab34a rab34a rab11al rab11al rab39ba rab39ba rab4b rab4b rab7a rab7a rab7b rab7b rab3da rab3da rab5aa rab5aa rab32a rab32a rab5c rab5c rab35b rab35b rab6bb rab6bb rab1ab rab1ab rab42a rab42a rab13 rab13 rab15 rab15 rab14l rab14l rab30 rab30 rab1ba rab1ba rab32b rab32b rab11a rab11a rab11ba rab11ba rab40b rab40b rab9a rab9a rab10 rab10 rab1aa rab1aa rab33ba rab33ba rab41 rab41 rab18a rab18a rab3aa rab3aa rab1bb rab1bb rab33a rab33a rab25a rab25a rab43 rab43 rab40c rab40c cracr2aa cracr2aa rab8b rab8b rab39bb rab39bb zgc:162171 zgc:162171 zgc:162879 zgc:162879 rab3ab rab3ab rasef rasef zgc:100918 zgc:100918 F1QYV4_DANRE F1QYV4_DANRE rab14 rab14 rab11bb rab11bb cracr2ab cracr2ab rab3c rab3c rab38c rab38c rab34b rab34b rab38b rab38b rab8a rab8a rab27b rab27b rab44 rab44 LOC100330257 LOC100330257 rab6a rab6a RAB19 RAB19 rab42b rab42b rab27a rab27a rab18b rab18b rab25b rab25b ENSDARP00000135399 ENSDARP00000135399 megf8-2 megf8-2 rab6ba rab6ba rab35a rab35a rab26 rab26 rab9b rab9b ENSDARP00000140736 ENSDARP00000140736 rab3db rab3db rab21 rab21 rab12 rab12 rab3b rab3b rab31 rab31
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
E7EY00_DANRESi:dkey-16l2.16. (209 aa)
rab23RAB23, member RAS oncogene family. (237 aa)
rab2aRAB2A, member RAS oncogene family. (212 aa)
rab5bRAB5B, member RAS oncogene family. (214 aa)
zgc:171927Zgc:171927. (210 aa)
zgc:101559Zgc:101559. (233 aa)
rab22aRAB22A, member RAS oncogene family. (196 aa)
rab5abRAB5A, member RAS oncogene family like. (216 aa)
rab4aRas-related protein Rab-4A; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. (213 aa)
rab34aRAB34, member RAS oncogene family a. (260 aa)
rab11alRAB11a, member RAS oncogene family,-like. (216 aa)
rab39baRAB39B, member RAS oncogene family a. (213 aa)
rab4bRas-related protein Rab-4B; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. (213 aa)
rab7aRAB7a, member RAS oncogene family. (207 aa)
rab7bRAB7b, member RAS oncogene family. (204 aa)
rab3daRAB3D, member RAS oncogene family, a. (223 aa)
rab5aaRAB5A, member RAS oncogene family, a. (216 aa)
rab32aRAB32a, member RAS oncogene family. (213 aa)
rab5cRAB5C, member RAS oncogene family. (221 aa)
rab35bRAB35, member RAS oncogene family b. (201 aa)
rab6bbRAB6B, member RAS oncogene family b. (208 aa)
rab1abRAB1A, member RAS oncogene family b. (201 aa)
rab42aRAB42, member RAS oncogene family a. (213 aa)
rab13Ras-related protein Rab-13; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab may be involved in endocytic recycling and may regulate the transport to the plasma membrane of transmembrane proteins. May regulate the assembly and the activity of tight jun [...] (200 aa)
rab15RAB15, member RAS oncogene family. (212 aa)
rab14lRAB14, member RAS oncogene family,-like. (215 aa)
rab30RAB30, member RAS oncogene family. (201 aa)
rab1baZRAB1B, member RAS oncogene family a. (201 aa)
rab32bRAB32b, member RAS oncogene family. (211 aa)
rab11aNovel protein similar to vertebrate Ras family. (215 aa)
rab11baRAB11B, member RAS oncogene family, a. (218 aa)
rab40bRAB40B, member RAS oncogene family. (279 aa)
rab9aRAB9A, member RAS oncogene family. (201 aa)
rab10RAB10, member RAS oncogene family. (201 aa)
rab1aaRAB1A, member RAS oncogene family a. (201 aa)
rab33baRAB33B, member RAS oncogene family a. (239 aa)
rab41RAB41, member RAS oncogene family. (211 aa)
rab18aRAB18A, member RAS oncogene family. (205 aa)
rab3aaRAB3A, member RAS oncogene family, a. (220 aa)
rab1bbRAB1B, member RAS oncogene family b. (201 aa)
rab33aRAB33A, member RAS oncogene family. (236 aa)
rab25aNovel protein similar to vertebrate RAB25, member RAS oncogene family (RAB25). (210 aa)
rab43RAB43, member RAS oncogene family. (208 aa)
rab40cRAB40c, member RAS oncogene family. (279 aa)
cracr2aaCalcium release activated channel regulator 2A. (718 aa)
rab8bRAB8B, member RAS oncogene family. (209 aa)
rab39bbRAB39B, member RAS oncogene family b. (213 aa)
zgc:162171Zgc:162171 protein. (224 aa)
zgc:162879Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP. (663 aa)
rab3abRAB3A, member RAS oncogene family, b. (220 aa)
rasefRas and EF-hand domain-containing protein. (706 aa)
zgc:100918Zgc:100918. (208 aa)
F1QYV4_DANRESi:dkey-13a21.4. (205 aa)
rab14RAB14, member RAS oncogene family. (215 aa)
rab11bbRAB11B, member RAS oncogene family, b. (218 aa)
cracr2abCalcium release-activated channel regulator 2Ab. (773 aa)
rab3cRAB3C, member RAS oncogene family. (224 aa)
rab38cRAB38c, member of RAS oncogene family. (213 aa)
rab34bRAB34, member RAS oncogene family b. (254 aa)
rab38bRAB38b, member of RAS oncogene family. (210 aa)
rab8aRAB8A, member RAS oncogene family. (207 aa)
rab27bRAB27B, member RAS oncogene family. (224 aa)
rab44RAB44, member RAS oncogene family. (1952 aa)
LOC100330257Uncharacterized protein. (212 aa)
rab6aRAB6A, member RAS oncogene family. (208 aa)
RAB19RAB19, member RAS oncogene family. (217 aa)
rab42bRAB42, member RAS oncogene family. (218 aa)
rab27aRAB27A, member RAS oncogene family. (222 aa)
rab18bRas-related protein Rab-18-B; Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes. Plays a key role in eye and brain development and neurodegeneration; Belongs to the small GTPase superfamily. Rab family. (205 aa)
rab25bRAB25, member RAS oncogene family b. (210 aa)
ENSDARP00000135399Si:dkey-34d22.2. (183 aa)
megf8-2Multiple EGF-like-domains 8. (173 aa)
rab6baRAB6B, member RAS oncogene family a. (215 aa)
rab35aUncharacterized protein. (195 aa)
rab26Uncharacterized protein. (228 aa)
rab9bRAB9B, member RAS oncogene family. (202 aa)
ENSDARP00000140736Uncharacterized protein. (195 aa)
rab3dbRAB3D, member RAS oncogene family, b. (220 aa)
rab21RAB21, member RAS oncogene family. (216 aa)
rab12RAB12, member RAS oncogene family. (235 aa)
rab3bRAB3B, member RAS oncogene family. (217 aa)
rab31Uncharacterized protein. (196 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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