STRINGSTRING
gata2b gata2b gata6 gata6 gata4 gata4 mta1 mta1 trps1 trps1 gata1a gata1a gata3 gata3 gata5 gata5 gata1b gata1b gata2a gata2a rerea rerea mta2 mta2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gata2bGATA-binding protein 2b. (428 aa)
gata6GATA-binding protein 6. (501 aa)
gata4GATA-binding protein 4. (352 aa)
mta1Metastasis-associated 1. (617 aa)
trps1Trichorhinophalangeal syndrome I. (1243 aa)
gata1aGATA-binding protein 1a. (418 aa)
gata3Transcription factor GATA-3. (438 aa)
gata5Transcription factor gata5. (383 aa)
gata1bGATA-binding protein 1b. (361 aa)
gata2aGATA-binding protein 2a. (456 aa)
rereaArginine-glutamic acid dipeptide (RE) repeats a. (1531 aa)
mta2Metastasis-associated 1 family, member 2. (631 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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