STRINGSTRING
fgf13b fgf13b egr2a egr2a badb badb srfa srfa creb1a creb1a bmp4 bmp4 fgf23 fgf23 etv5b etv5b fgf18b fgf18b egr2b egr2b ptpn1 ptpn1 fgf16 fgf16 fgf14 fgf14 snai2 snai2 fgf8b fgf8b nras nras fgf24 fgf24 egr1 egr1 spry2 spry2 eef2k eef2k rps6ka3a rps6ka3a sh3glb2a sh3glb2a fgf5 fgf5 fgf10a fgf10a braf braf sh3glb1b sh3glb1b etv2 etv2 chrd chrd fosab fosab nr2f5 nr2f5 mapk14a mapk14a mapk1 mapk1 mapk14b mapk14b ets1 ets1 cbl cbl atf3 atf3 mycn mycn gata5 gata5 fgf13a fgf13a eif4e1b eif4e1b zgc:55558 zgc:55558 noto noto mapkapk2a mapkapk2a mknk2b mknk2b fgf8a fgf8a etv4 etv4 map2k2a map2k2a fgfr1a fgfr1a mapk8b mapk8b fgfr3 fgfr3 mapk12a mapk12a fgf6a fgf6a usf1l usf1l fgf1a fgf1a sp8a sp8a map2k1 map2k1 sh3gl3b sh3gl3b tbx16 tbx16 sp8b sp8b gbx2 gbx2 fgfr1op2 fgfr1op2 atf7a atf7a map3k7 map3k7 fgf20a fgf20a gemin2 gemin2 map2k6 map2k6 sos1 sos1 tbxta tbxta sp9 sp9 il17rd il17rd fgf10b fgf10b fgfrl1b fgfrl1b sox32 sox32 fgf17 fgf17 dusp1 dusp1 shcbp1 shcbp1 cdh1 cdh1 fgf19 fgf19 sox17 sox17 fgf3 fgf3 creb1b creb1b rps6kal rps6kal fgfr2 fgfr2 grb2b grb2b fgf7 fgf7 plcg1 plcg1 mapk7 mapk7 araf araf fgf11a fgf11a frs2b frs2b sh3glb2b sh3glb2b tbx16l tbx16l mapkapk5 mapkapk5 pcdh8 pcdh8 snai1a snai1a sp1 sp1 junba junba fgf20b fgf20b fgf18a fgf18a map2k4a map2k4a eif4ea eif4ea gbx1 gbx1 dusp6 dusp6 mapk3 mapk3 elk4 elk4 sh3gl1b sh3gl1b pla2g4aa pla2g4aa spry4 spry4 sh3gl2a sh3gl2a rasgrf2b rasgrf2b fgfrl1a fgfrl1a raf1b raf1b gsc gsc ptpn11a ptpn11a rps6kb1b rps6kb1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fgf13bFibroblast growth factor; Belongs to the heparin-binding growth factors family. (257 aa)
egr2aEarly growth response 2a. (393 aa)
badbBCL2-associated agonist of cell death b. (147 aa)
srfaSerum response factor a. (539 aa)
creb1acAMP-responsive element-binding protein 1a. (318 aa)
bmp4Bone morphogenetic protein 4. (400 aa)
fgf23Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family. (258 aa)
etv5bETS variant transcription factor 5b. (524 aa)
fgf18bFibroblast growth factor 18b; Belongs to the heparin-binding growth factors family. (213 aa)
egr2bEarly growth response protein 2b; Sequence-specific DNA-binding transcription factor. Binds to two specific DNA sites located in the promoter region of HOXA4. (412 aa)
ptpn1Protein tyrosine phosphatase non-receptor type 1. (350 aa)
fgf16Fibroblast growth factor 16; Plays a crucial role in pectoral fin bud outgrowth. Belongs to the heparin-binding growth factors family. (203 aa)
fgf14Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (248 aa)
snai2Snail homolog 2 (Drosophila). (257 aa)
fgf8bFibroblast growth factor 8b; May act as signaling molecule during development of the midbrain-hindbrain boundary (MHB) organizer, and be involved in patterning of the nervous system. (212 aa)
nrasGTPase NRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity; Belongs to the small GTPase superfamily. Ras family. (188 aa)
fgf24Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
egr1Early growth response protein 1; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes (By similarity). Binds double-stranded target DNA, irrespective of the cytosine methylation status (By similarity). Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Mediates responses to ischemia and hypoxia; regulates the express [...] (511 aa)
spry2Sprouty RTK-signaling antagonist 2. (301 aa)
eef2kEukaryotic elongation factor 2 kinase. (706 aa)
rps6ka3aRibosomal protein S6 kinase. (732 aa)
sh3glb2aSH3-domain GRB2-like endophilin B2a. (381 aa)
fgf5Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (225 aa)
fgf10aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (201 aa)
brafB-Raf proto-oncogene, serine/threonine kinase. (817 aa)
sh3glb1bSH3-domain GRB2-like endophilin B1b. (360 aa)
etv2ETS variant transcription factor 2. (366 aa)
chrdChordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes (By similarity); Belongs to the chordin family. (940 aa)
fosabV-fos FBJ murine osteosarcoma viral oncogene homolog Ab. (349 aa)
nr2f5Nuclear receptor subfamily 2 group F member 5; Putative receptor that is required in photoreceptor cells precursors during eye development; Belongs to the nuclear hormone receptor family. NR2 subfamily. (403 aa)
mapk14aMitogen-activated protein kinase 14A; Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Mapk14a is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. Some of the targets are downstream kinases which are [...] (361 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
mapk14bMitogen-activated protein kinase 14B; Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Mapk14b is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. Some of the targets are downstream kinases which are [...] (361 aa)
ets1V-ets avian erythroblastosis virus E26 oncogene homolog 1. (266 aa)
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (913 aa)
atf3Activating transcription factor 3. (202 aa)
mycnN-myc protein; May function as a transcription factor. (503 aa)
gata5Transcription factor gata5. (383 aa)
fgf13aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (246 aa)
eif4e1bEukaryotic translation initiation factor 4E-1B; Does not appear to be a mRNA-cap-binding protein. (214 aa)
zgc:55558Zgc:55558 protein. (187 aa)
notoNotochord homeobox. (241 aa)
mapkapk2aMitogen-activated protein kinase-activated protein kinase 2a; Belongs to the protein kinase superfamily. (382 aa)
mknk2bMAPK-interacting serine/threonine kinase 2b; Belongs to the protein kinase superfamily. (475 aa)
fgf8aFibroblast growth factor 8; Plays an important role in the regulation of embryonic development, cell proliferation, cell differentiation and cell migration (By similarity). Required for Kupffer's vesicle ciliogenesis. (210 aa)
etv4ETS translocation variant 4; Transcriptional activator that binds to the (5'-CCGGA[AT]-3') motif. May control the acquisition of specific cell fates at an early stage during development of the somites and nervous system. May mediate the cellular effects of the fibroblast growth factors on embryogenesis. (494 aa)
map2k2aMitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (397 aa)
fgfr1aFibroblast growth factor receptor 1-A; Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. Required for normal mesoderm patterning and normal skeletogenesis. Phosphorylates PLCG1, FRS2, GAB1 and SHB. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol-1,4,5-trisphosphate. Phosphorylation of FRS2 triggers [...] (809 aa)
mapk8bMitogen-activated protein kinase 8; Responds to activation by environmental stress and pro- inflammatory cytokines by phosphorylating a number of transcription factors, primarily components of AP-1 such as c-Jun and ATF2 and thus regulates AP-1 transcriptional activity. May play a role in the regulation of the circadian clock. (384 aa)
fgfr3Fibroblast growth factor receptor 3; Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Phosphorylates PLCG1, CBL and FRS2. Ligand binding l [...] (819 aa)
mapk12aMitogen-activated protein kinase 12; Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. MAPK12 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. Some of the targets are downstream kinases such as MAP [...] (363 aa)
fgf6aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (205 aa)
usf1lUpstream transcription factor 2, c-fos interacting. (283 aa)
fgf1aPutative fibroblast growth factor 1; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with i [...] (147 aa)
sp8aSp8 transcription factor a. (406 aa)
map2k1Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
sh3gl3bSH3-domain GRB2-like 3b. (386 aa)
tbx16T-box transcription factor 16. (470 aa)
sp8bTranscription factor Sp8; Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos. Belongs to the Sp1 C2H2-type zinc-finger protein family. (455 aa)
gbx2Gastrulation brain homeo box 2. (342 aa)
fgfr1op2FGFR1 oncogene partner 2 homolog. (215 aa)
atf7aCyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (497 aa)
map3k7Mitogen-activated protein kinase kinase kinase 7. (551 aa)
fgf20aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (261 aa)
map2k6Dual specificity mitogen-activated protein kinase kinase 6; Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is n [...] (363 aa)
sos1Son of sevenless homolog 1 (Drosophila). (714 aa)
tbxtaT-box transcription factor T-A; Involved in the transcriptional regulation of genes required for mesoderm differentiation, including itself. Indispensable for the formation of the notochord and the tail structure. Functions together with tbx16/spadetail in development of trunk and tail mesoderm. Functions by itself early in development to repress medial floor plate and promote notochord fate but at later times, functions together with tbx16/spadetail to promote medial floor plate formation. Acts in a parallel pathway to, but cooperates with, non-canonical wnt-signaling during tail form [...] (423 aa)
sp9Transcription factor Sp9; Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos. (439 aa)
il17rdInterleukin-17 receptor D; Feedback inhibitor of fibroblast growth factor mediated Ras- MAPK signaling and ERK activation. May inhibit FGF-induced FGFR1 tyrosine phosphorylation. (743 aa)
fgf10bFibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
fgfrl1bFibroblast growth factor receptor-like 1b. (481 aa)
sox32SRY-box transcription factor 32. (307 aa)
fgf17Fibroblast growth factor 17; Involved in dorsal-ventral embryonic patterning, by promoting expression of bone morphogenetic protein (BMP) antagonists such as chd. Also involved in anterior-posterior neural patterning and in mesoderm induction; Belongs to the heparin-binding growth factors family. (215 aa)
dusp1Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (369 aa)
shcbp1SHC SH2-domain-binding protein 1. (721 aa)
cdh1Cadherin 1, type 1, E-cadherin (epithelial); Cadherins are calcium-dependent cell adhesion proteins. (877 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (209 aa)
sox17SRY-box transcription factor 17. (413 aa)
fgf3Fibroblast growth factor 3; Plays an important role in the regulation of embryonic development, cell proliferation, and cell differentiation. Belongs to the heparin-binding growth factors family. (256 aa)
creb1bcAMP-responsive element-binding protein 1b. (324 aa)
rps6kalRibosomal protein S6 kinase alpha-6; Serine/threonine kinase that may play a role in mediating the growth-factor and stress induced activation of the transcription factor CREB; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (740 aa)
fgfr2Fibroblast growth factor receptor 2; Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation, migration and apoptosis, and in the regulation of embryonic development. Required for normal embryonic patterning, limb bud development, lung morphogenesis, osteogenesis and skin development. Plays an essential role in the regulation of osteoblast differentiation, proliferation and apoptosis, and is required for normal skeleton development. Promotes cell proliferation in kerati [...] (838 aa)
grb2bGrowth factor receptor-bound protein 2b. (217 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (180 aa)
plcg1Phosphoinositide phospholipase C. (1020 aa)
mapk7Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1080 aa)
arafA-Raf proto-oncogene, serine/threonine kinase. (604 aa)
fgf11aFibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
frs2bFibroblast growth factor receptor substrate 2b. (508 aa)
sh3glb2bSH3-domain GRB2-like endophilin B2b. (402 aa)
tbx16lT-box transcription factor TBX6L; Probable transcriptional regulator involved in developmental processes. (488 aa)
mapkapk5Mitogen-activated protein kinase-activated protein kinase 5. (471 aa)
pcdh8Protocadherin 8. (950 aa)
snai1aSnail family zinc finger 1a. (260 aa)
sp1Sp1 transcription factor. (594 aa)
junbaJunB proto-oncogene, AP-1 transcription factor subunit a. (325 aa)
fgf20bFibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
fgf18aFibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (208 aa)
map2k4aMitogen-activated protein kinase kinase 4A; Belongs to the protein kinase superfamily. (404 aa)
eif4eaEukaryotic translation initiation factor 4E-1A; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. (215 aa)
gbx1Gastrulation brain homeobox 1. (316 aa)
dusp6Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (382 aa)
mapk3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (392 aa)
elk4ETS transcription factor ELK4. (443 aa)
sh3gl1bSH3-domain GRB2-like 1b. (351 aa)
pla2g4aaCytosolic phospholipase A2; Selectively hydrolyzes arachidonyl phospholipids in the sn-2 position releasing arachidonic acid. Together with its lysophospholipid activity, it is implicated in the initiation of the inflammatory response. (741 aa)
spry4Sprouty homolog 4 (Drosophila). (310 aa)
sh3gl2aSH3 domain-containing GRB2-like 2a, endophilin A1. (347 aa)
rasgrf2bRas-specific guanine nucleotide-releasing factor 2; Functions as a calcium-regulated nucleotide exchange factor activating both Ras and rac1 through the exchange of bound GDP for GTP. May function in synaptic plasticity. (1244 aa)
fgfrl1aFibroblast growth factor receptor-like 1a. (483 aa)
raf1bRaf-1 proto-oncogene, serine/threonine kinase b. (629 aa)
gscHomeobox protein goosecoid. (240 aa)
ptpn11aTyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
rps6kb1bRibosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (502 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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