STRINGSTRING
dnajb6b dnajb6b klhl41b klhl41b cryaba cryaba desma desma mtmr12 mtmr12 washc4 washc4 klhl41a klhl41a tnnt3a tnnt3a ttn.2 ttn.2 myot myot ddx27 ddx27 tnnt3b tnnt3b mtm1 mtm1 cryabb cryabb smyd1b smyd1b capzb capzb plecb plecb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnajb6bDnaJ heat shock protein family (Hsp40) member B6b. (237 aa)
klhl41bKelch-like protein 41b; Involved in skeletal muscle development and maintenance. (605 aa)
cryabaCrystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family. (168 aa)
desmaDesmin a; Belongs to the intermediate filament family. (488 aa)
mtmr12Myotubularin-related protein 12; Acts as an adapter for the myotubularin phosphatase mtm1 to regulate mtm1 protein stability and possibly its intracellular location. By stabilizing mtm1 protein levels, required for skeletal muscle maintenance but not for myogenesis. In skeletal muscle cells, does not regulate mtm1 subcellular localization. (736 aa)
washc4WASH complex subunit 4. (1173 aa)
klhl41aKelch-like protein 41a; Involved in skeletal muscle development and differentiation. (599 aa)
tnnt3aTroponin T type 3a (skeletal, fast). (230 aa)
ttn.2Titin, tandem duplicate 2. (26265 aa)
myotMyotilin. (561 aa)
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. (776 aa)
tnnt3bTroponin T type 3b (skeletal, fast). (284 aa)
mtm1Myotubularin 1. (639 aa)
cryabbCrystallin, alpha B, b; Belongs to the small heat shock protein (HSP20) family. (165 aa)
smyd1bSET and MYND domain-containing 1b. (486 aa)
capzbF-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (273 aa)
plecbPlectin b. (4535 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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