STRINGSTRING
cdh23 cdh23 tmc2b tmc2b lhfpl5b lhfpl5b get1 get1 tmie tmie ap1b1 ap1b1 pcdh15a pcdh15a clrn1 clrn1 Ctbp2l Ctbp2l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdh23Cadherin-related 23. (2883 aa)
tmc2bTransmembrane channel-like protein 2-B; Belongs to the TMC family. (892 aa)
lhfpl5bLHFPL tetraspan subfamily member 5b. (221 aa)
get1Tail-anchored protein insertion receptor WRB; Receptor for ASNA1/TRC40-mediated insertion of tail-anchored (TA) proteins into the ER membrane. (170 aa)
tmieTransmembrane inner ear. (231 aa)
ap1b1AP complex subunit beta. (947 aa)
pcdh15aProtocadherin-related 15a. (1796 aa)
clrn1Clrn1 protein. (232 aa)
Ctbp2lUncharacterized protein. (531 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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