Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| agrn | nrxn2a | ENSDARP00000133459 | ENSDARP00000118463 | Agrin. | Neurexin 2a. | 0.743 |
| ccndx | epas1b | ENSDARP00000094278 | ENSDARP00000074832 | Cyclin Dx; Belongs to the cyclin family. | Endothelial PAS domain protein 1b. | 0.493 |
| chodl | hnrnpr | ENSDARP00000041334 | ENSDARP00000134461 | Chondrolectin; Plays a role in the development of the nervous system such as in neurite outgrowth and elongation. Involved in motor axon growth and guidance. Required for correct interactions of motor axons with the horizontal myoseptum. | Heterogeneous nuclear ribonucleoprotein R. | 0.436 |
| chp1 | ncaldb | ENSDARP00000110730 | ENSDARP00000109673 | Calcineurin-like EF-hand protein 1. | Neurocalcin-delta B; May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions (By similarity). | 0.905 |
| epas1b | ccndx | ENSDARP00000074832 | ENSDARP00000094278 | Endothelial PAS domain protein 1b. | Cyclin Dx; Belongs to the cyclin family. | 0.493 |
| fus | grna | ENSDARP00000055339 | ENSDARP00000113859 | FUS RNA-binding protein. | Granulin a. | 0.408 |
| fus | hnrnpr | ENSDARP00000055339 | ENSDARP00000134461 | FUS RNA-binding protein. | Heterogeneous nuclear ribonucleoprotein R. | 0.731 |
| fus | smn1 | ENSDARP00000055339 | ENSDARP00000017636 | FUS RNA-binding protein. | Survival motor neuron protein 1; The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. It may also play a role in the metabolism of snoRNPs. Required in motor neurons and proprioceptive neurons to ensure correct U12 intron splicing and proper levels of tmem41b mRNA. Required for the maturation of motor neuron axonal branches and dendrites. | 0.777 |
| grna | fus | ENSDARP00000113859 | ENSDARP00000055339 | Granulin a. | FUS RNA-binding protein. | 0.408 |
| grna | notch1a | ENSDARP00000113859 | ENSDARP00000137942 | Granulin a. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.414 |
| hnrnpr | chodl | ENSDARP00000134461 | ENSDARP00000041334 | Heterogeneous nuclear ribonucleoprotein R. | Chondrolectin; Plays a role in the development of the nervous system such as in neurite outgrowth and elongation. Involved in motor axon growth and guidance. Required for correct interactions of motor axons with the horizontal myoseptum. | 0.436 |
| hnrnpr | fus | ENSDARP00000134461 | ENSDARP00000055339 | Heterogeneous nuclear ribonucleoprotein R. | FUS RNA-binding protein. | 0.731 |
| hnrnpr | smn1 | ENSDARP00000134461 | ENSDARP00000017636 | Heterogeneous nuclear ribonucleoprotein R. | Survival motor neuron protein 1; The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. It may also play a role in the metabolism of snoRNPs. Required in motor neurons and proprioceptive neurons to ensure correct U12 intron splicing and proper levels of tmem41b mRNA. Required for the maturation of motor neuron axonal branches and dendrites. | 0.835 |
| isl2a | mnx2b | ENSDARP00000020636 | ENSDARP00000100110 | Insulin gene enhancer protein isl-2a; Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in subtype specialization of primary motoneurons. | Motor neuron and pancreas homeobox 2b. | 0.447 |
| isl2a | prdm14 | ENSDARP00000020636 | ENSDARP00000110909 | Insulin gene enhancer protein isl-2a; Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in subtype specialization of primary motoneurons. | PR domain-containing 14. | 0.466 |
| met | notch1a | ENSDARP00000123904 | ENSDARP00000137942 | MET proto-oncogene, receptor tyrosine kinase. | Neurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] | 0.521 |
| met | plxnb1b | ENSDARP00000123904 | ENSDARP00000131217 | MET proto-oncogene, receptor tyrosine kinase. | Plexin b1b. | 0.922 |
| mnx2b | isl2a | ENSDARP00000100110 | ENSDARP00000020636 | Motor neuron and pancreas homeobox 2b. | Insulin gene enhancer protein isl-2a; Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in subtype specialization of primary motoneurons. | 0.447 |
| ncaldb | chp1 | ENSDARP00000109673 | ENSDARP00000110730 | Neurocalcin-delta B; May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions (By similarity). | Calcineurin-like EF-hand protein 1. | 0.905 |
| ncaldb | smn1 | ENSDARP00000109673 | ENSDARP00000017636 | Neurocalcin-delta B; May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions (By similarity). | Survival motor neuron protein 1; The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. It may also play a role in the metabolism of snoRNPs. Required in motor neurons and proprioceptive neurons to ensure correct U12 intron splicing and proper levels of tmem41b mRNA. Required for the maturation of motor neuron axonal branches and dendrites. | 0.669 |
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