STRINGSTRING
pcgf1 pcgf1 ewsr1b ewsr1b traf3ip1 traf3ip1 flt1 flt1 esco2 esco2 nsd2 nsd2 col1a1b col1a1b tbx16 tbx16 col1a1a col1a1a cdh2 cdh2 prkci prkci sec63 sec63 kif11 kif11 degs1 degs1 smarcd1 smarcd1 jag2b jag2b zc4h2 zc4h2 plod2 plod2 dla dla smo smo rras rras pink1 pink1 prdm12b prdm12b nedd1 nedd1 neflb neflb gata3 gata3 chm chm dvl2 dvl2 noto noto ewsr1a ewsr1a pes pes eftud2 eftud2 spast spast glra4a glra4a nek1 nek1 vangl2 vangl2 rfx4 rfx4 asah1b asah1b tdgf1 tdgf1 plxna3 plxna3 dnajc9 dnajc9 adarb1a adarb1a capn1a capn1a gmds gmds kif1b kif1b slc25a46 slc25a46 lingo1b lingo1b ache ache scrt2 scrt2 pmm2 pmm2 cln3 cln3 gdf3 gdf3 sulf1 sulf1 fer1l6 fer1l6 terfa terfa utp11 utp11 gli3 gli3 prickle1a prickle1a olig2 olig2 dharma dharma coasy coasy ppm1e ppm1e wdr78 wdr78 abcc4 abcc4 pou5f3 pou5f3 rdh10a rdh10a fzd8a fzd8a ist1 ist1 gdf6a gdf6a aldh1a2 aldh1a2 sox3 sox3 lmx1bb lmx1bb pogza pogza leo1 leo1 foxh1 foxh1 cybb cybb cdk5 cdk5 chaf1b chaf1b gabra2a gabra2a Nfascb Nfascb plk1 plk1 ctnnb2 ctnnb2 ihhb ihhb evx2 evx2 sdc4 sdc4 gba2 gba2 kifbp kifbp shank3a shank3a peli1b peli1b syngap1b syngap1b prpf4 prpf4 msi1 msi1 ptk7a ptk7a actr10 actr10 psenen psenen swap70b swap70b sptan1 sptan1 gria2a gria2a skib skib vsx1 vsx1 stat3 stat3 abhd12 abhd12 gbx1 gbx1 glra2 glra2 ids ids cdx4 cdx4 gba gba ocrl ocrl mak16 mak16 ascc1 ascc1 sox10 sox10 cluap1 cluap1 abcd1 abcd1 twist2 twist2 dtx4a dtx4a adgra2 adgra2 twistnb twistnb mtor mtor ptena ptena auts2a auts2a rab11fip4a rab11fip4a slc33a1 slc33a1 pard3ab pard3ab fshb fshb gnl3 gnl3 clu clu gle1 gle1 loxa loxa fbxw7 fbxw7 grna grna ccnk ccnk htr1ab htr1ab med23 med23 ppp1r12a ppp1r12a col1a2 col1a2 dnaaf3 dnaaf3 il7r il7r vegfab vegfab prpf8 prpf8 l1camb l1camb sox11b sox11b fut8a fut8a otpa otpa pitpnaa pitpnaa col17a1a col17a1a cenph cenph lrrk2 lrrk2 als2b als2b tert tert pla2g6 pla2g6 cntnap1 cntnap1 cdc73 cdc73 slc6a6b slc6a6b psd2 psd2 dnaaf4 dnaaf4 ptpn12 ptpn12 mib1 mib1 agrn agrn cfap53 cfap53 wnt5b wnt5b ap1g2 ap1g2 gabra1 gabra1 psen1 psen1 rtn4b rtn4b trip4 trip4 cdh1 cdh1 glrx2 glrx2 hmgcs1 hmgcs1 exosc3 exosc3 drd4a drd4a ptmab ptmab notch1a notch1a dync1h1 dync1h1 thsd7aa thsd7aa ap1g1 ap1g1 adgrg1 adgrg1 etfa etfa evx1 evx1 ndr2 ndr2 nptx2a nptx2a tmem33 tmem33 csf1ra csf1ra prmt8b prmt8b bmp1a bmp1a rraga rraga gdpd5a gdpd5a nkx2.2a nkx2.2a tfeb tfeb
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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gene neighborhood
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pcgf1Polycomb group RING finger protein 1; Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. (295 aa)
ewsr1bEwing sarcoma breakpoint region 1b. (579 aa)
traf3ip1TRAF3-interacting protein 1; Plays an inhibitory role on IL13 signaling by binding to IL13RA1 and recruits TRAF3 and DISC1 to the microtubules. Involved in the regulation of microtubule cytoskeleton organization. Is a negative regulator of microtubule stability, acting through the control of MAP4 levels. Involved in ciliogenesis (By similarity). (629 aa)
flt1Vascular endothelial growth factor receptor 1 isoform 1 precursor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1272 aa)
esco2N-acetyltransferase ESCO2; Acetyltransferase required for the establishment of sister chromatid cohesion. Couples the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together (By similarity). Essential for early development. (609 aa)
nsd2Nuclear receptor-binding SET domain protein 2. (1461 aa)
col1a1bCollagen, type I, alpha 1b. (1449 aa)
tbx16T-box transcription factor 16. (470 aa)
col1a1aCollagen, type I, alpha 1a. (1447 aa)
cdh2Cadherin-2; Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion (By similarity). Cadherins contribute to the sorting of heterogeneous cell types, and thereby play an important role during embryonic development. Required for normal neural tube morphogenesis. Required to allow mid- and hindbrain neurons to reach and maintain their appropriate positions within the neural tube by restricting neuronal motility within the embryonic mid- and hindbrain. (893 aa)
prkciProtein kinase C iota type; Calcium- and diacylglycerol-independent serine/ threonine- protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway (By similarity). Is required for the formation and maintenance of the zonula adherens during early epithelial development and plays a critical role in organ morphogenesis and in regulating the orientation of cell division. (588 aa)
sec63SEC63 homolog, protein translocation regulator. (751 aa)
kif11Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1062 aa)
degs1Delta(4)-desaturase, sphingolipid 1. (323 aa)
smarcd1SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1. (510 aa)
jag2bDelta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1254 aa)
zc4h2Zinc finger C4H2 domain-containing protein; Plays a role in GABAergic and V2 interneurons differentiation. Involved in motoneuron development and in neuromuscular junction formation. (224 aa)
plod2Procollagen lysine 2-oxoglutarate 5-dioxygenase 2b isoform. (754 aa)
dlaDelta-like protein A; Acts as a ligand for Notch receptors and is involved in primary neurogenesis. Can activate Notch receptors, thereby playing a key role in lateral inhibition, a process that prevents the immediate neighbors of each nascent neural cell from simultaneously embarking on neural differentiation. Required for boundary formation during segmentation of the hindbrain. Required for midline cell fate specification prior to germ layer formation; regulates specification of floorplate, notochord and hypochord. In inner ear, it prevents adjacent cells from adopting the same cell [...] (772 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (822 aa)
rrasRelated RAS viral (R-ras) oncogene homolog. (196 aa)
pink1PTEN-induced kinase 1. (574 aa)
prdm12bPR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily. (366 aa)
nedd1NEDD1 gamma-tubulin ring complex targeting factor. (677 aa)
neflbNeurofilament, light polypeptide b; Belongs to the intermediate filament family. (579 aa)
gata3Transcription factor GATA-3. (438 aa)
chmRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (666 aa)
dvl2Dishevelled segment polarity protein 2. (747 aa)
notoNotochord homeobox. (241 aa)
ewsr1aEWS RNA-binding protein 1a. (626 aa)
pesPescadillo; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (583 aa)
eftud2Elongation factor Tu GTP-binding domain-containing 2. (973 aa)
spastSpastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] (570 aa)
glra4aGlycine receptor, alpha 4a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (457 aa)
nek1NIMA-related kinase 1. (1200 aa)
vangl2Vang-like protein 2; Plays a role in non-canonical Wnt/planar cell polarity (PCP) signaling to regulate convergent extension cell movements during gastrulation. Acts together with scrib and prickle1 and localizes prickle1 and dvl2/dsh to the plasma membrane. Has an overlapping role with kny during both convergent extension and eye development. In the eye, involved in establishing proper alignment of the anterior neural plate and midline cells expressing shha and shhb/twhh. Has indirect effects on a number of other developmental processes including notochord shape formation, neural prog [...] (526 aa)
rfx4Transcription factor RFX4; May activate transcription by interacting directly with the X-box; Belongs to the RFX family. (735 aa)
asah1bN-acylsphingosine amidohydrolase (acid ceramidase) 1b; Belongs to the acid ceramidase family. (395 aa)
tdgf1Teratocarcinoma-derived growth factor 1. (190 aa)
plxna3Plexin A3; Coreceptor for class 3 semaphorins. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for specific semaphorins, and its cytoplasmic domain is required for the activation of down-stream signaling events in the cytoplasm. (1892 aa)
dnajc9DnaJ (Hsp40) homolog, subfamily C, member 9. (252 aa)
adarb1aAdenosine deaminase RNA-specific B1a. (720 aa)
capn1aCalpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family. (704 aa)
gmdsGDP-mannose 4,6 dehydratase. (370 aa)
kif1bKinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1770 aa)
slc25a46Solute carrier family 25 member 46; May play a role in mitochondrial dynamics by controlling mitochondrial membrane fission. (405 aa)
lingo1bLeucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B; May play a role in regulating axonal regeneration and plasticity in the adult central nervous system. (622 aa)
acheAcetylcholinesterase; Terminates signal transduction at the neuromuscular junction by rapid hydrolysis of the acetylcholine released into the synaptic cleft. (634 aa)
scrt2Scratch family zinc finger 2. (312 aa)
pmm2Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (250 aa)
cln3Battenin. (446 aa)
gdf3Protein DVR-1; Serves to facilitate the differentiation of either mesoderm or endoderm either as a cofactor in an instructive signal or by providing permissive environment. (355 aa)
sulf1Sulfatase FP1c. (1099 aa)
fer1l6Fer-1-like family member 6. (1790 aa)
terfaTelomeric repeat-binding factor a. (574 aa)
utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (250 aa)
gli3GLI family zinc finger 3. (1553 aa)
prickle1aPrickle homolog 1a. (793 aa)
olig2Oligodendrocyte lineage transcription factor 2. (273 aa)
dharmaDharma. (192 aa)
coasyCoA synthase. (554 aa)
ppm1eProtein phosphatase, Mg2+/Mn2+-dependent, 1E. (633 aa)
wdr78WD repeat domain 78. (778 aa)
abcc4ATP-binding cassette, sub-family C (CFTR/MRP), member 4. (1327 aa)
pou5f3POU domain, class 5, transcription factor 1; Involved in early development of embryos, especially in the process of gastrulation. May play an important role in establishing and specifying rhombomeric segments. Seems to be required to maintain the cells in a highly undifferentiated state. In contrast to POU2, T-POU2 lacks DNA-binding activity because of its incomplete pou domain structure. Overexpression of POU2 does not have any effect on development, whereas overexpression of t-POU2 causes developmental retardation or arrest before gastrulation; Belongs to the POU transcription factor [...] (472 aa)
rdh10aRetinol dehydrogenase 10-A; Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol (By similarity); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (339 aa)
fzd8aFrizzled class receptor 8a; Belongs to the G-protein coupled receptor Fz/Smo family. (579 aa)
ist1IST1 factor-associated with ESCRT-III. (354 aa)
gdf6aGrowth/differentiation factor 6-A; Growth factor that controls proliferation and cellular differentiation in the retina. Plays a key role in regulating apoptosis during retinal development. Establishes dorsal-ventral positional information in the retina and controls the formation of the retinotectal map. Functions maternally in dorsal/ventral patterning to induce the expression of the zygotic bmp2b and bmp4 genes and ventralize embryos. Zygotic expression does not appear to regulate axis specification, but instead functions to establish the integrity of the axial vessels during embryon [...] (404 aa)
aldh1a2Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family. (518 aa)
sox3Transcription factor Sox-3; Transcriptional activator. (300 aa)
lmx1bbLIM homeobox transcription factor 1, beta 1. (375 aa)
pogzaPogo transposable element-derived with ZNF domain a. (1277 aa)
leo1RNA polymerase-associated protein LEO1; Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II. PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3) (By similarity). PAF1C seems to be required for multiple steps in cardiac formation. Involved in heart development and required for differentiation of the atrioventricular boundary. Required for neural crest cell development. (696 aa)
foxh1Forkhead box protein H1; Transcriptional activator. Activates an activin response element (ARE). Recognizes and binds to the DNA sequence 5'- TGT[GT][GT]ATT-3'. Modulator of nodal signaling required for organizer formation. Also required for the development of dorsal axial structures and left-right symmetry. (472 aa)
cybbCytochrome b-245, beta polypeptide (chronic granulomatous disease). (565 aa)
cdk5Cyclin-dependent protein kinase 5; Belongs to the protein kinase superfamily. (292 aa)
chaf1bChromatin assembly factor 1, subunit B. (613 aa)
gabra2aGamma-aminobutyric acid type A receptor alpha2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (451 aa)
NfascbUncharacterized protein. (380 aa)
plk1Serine/threonine-protein kinase PLK. (595 aa)
ctnnb2Catenin, beta 2. (778 aa)
ihhbIndian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. (412 aa)
evx2Even-skipped homeobox 2. (418 aa)
sdc4Syndecan 4. (207 aa)
gba2Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (851 aa)
kifbpKIF-binding protein; Required for organization of axonal microtubules, and axonal outgrowth and maintenance during peripheral and central nervous system development. (631 aa)
shank3aSH3 and multiple ankyrin repeat domains 3a. (1509 aa)
peli1bPellino E3 ubiquitin protein ligase 1b. (425 aa)
syngap1bSynaptic Ras GTPase-activating protein 1b. (1507 aa)
prpf4PRP4 pre-mRNA-processing factor 4 homolog (yeast). (507 aa)
msi1Musashi RNA-binding protein 1. (297 aa)
ptk7aProtein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1061 aa)
actr10Actin-related protein 10; Belongs to the actin family. (415 aa)
psenenGamma-secretase subunit PEN-2; Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (amyloid- beta precursor protein). The gamma-secretase complex plays a role in Notch and Wnt signaling cascades and regulation of downstream processes via its role in processing key regulatory proteins. (101 aa)
swap70bSwitching B cell complex subunit SWAP70b. (588 aa)
sptan1Spectrin alpha, non-erythrocytic 1. (2480 aa)
gria2aGlutamate receptor, ionotropic, AMPA 2a. (875 aa)
skibV-ski avian sarcoma viral oncogene homolog b. (695 aa)
vsx1Visual system homeobox 1; May be involved in maintenance as well as cellular differentiation of retinal interneurons, such as bipolar cells. May play a role in establishing interneuronal cell classes in nonsensory as well as sensory systems; Belongs to the paired homeobox family. (340 aa)
stat3Signal transducer and activator of transcription. (806 aa)
abhd12Lysophosphatidylserine lipase ABHD12; Lysophosphatidylserine (LPS) lipase that mediates the hydrolysis of lysophosphatidylserine, a class of signaling lipids that regulates immunological and neurological processes (By similarity). Represents a major lysophosphatidylserine lipase in the brain, thereby playing a key role in the central nervous system (By similarity). Also able to hydrolyze oxidized phosphatidylserine; oxidized phosphatidylserine is produced in response to severe inflammatory stress and constitutes a proapoptotic 'eat me' signal. Also has monoacylglycerol (MAG) lipase act [...] (382 aa)
gbx1Gastrulation brain homeobox 1. (316 aa)
glra2Glycine receptor, alpha 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (449 aa)
idsIduronate 2-sulfatase. (561 aa)
cdx4Caudal type homeo box transcription factor 4. (270 aa)
gbaGlucosylceramidase. (518 aa)
ocrlOCRL inositol polyphosphate-5-phosphatase. (953 aa)
mak16Protein MAK16 homolog; Plays an essential role in early embryonic development. (305 aa)
ascc1Activating signal cointegrator 1 complex subunit 1. (249 aa)
sox10HMG-box transcription factor Sox10. (485 aa)
cluap1Clusterin-associated protein 1 homolog; Required for cilia biogenesis and maintenance in the kidney, the lateral line organ and eye. Appears to function within the multiple intraflagellar transport complex B (IFT-B). Belongs to the CLUAP1 family. (427 aa)
abcd1ATP-binding cassette sub-family D member 1; Plays a role in the transport of free very-long-chain fatty acids (VLCFAs) as well as their CoA-esters across the peroxisomal membrane by acting as an ATP-specific binding subunit releasing ADP after ATP hydrolysis (By similarity). Involved in oligodendrocyte patterning and myelination. (766 aa)
twist2Twist2. (163 aa)
dtx4aDeltex 4, E3 ubiquitin ligase a. (704 aa)
adgra2Adhesion G protein-coupled receptor A2; Endothelial receptor which functions together with reck to enable brain endothelial cells to selectively respond to Wnt7 signals (wnt7a or wnt7b). Plays a key role in Wnt7-specific responses: Required for normal central nervous system (CNS) vascularization where it functions cell-autonomously in the tip cells of sprouting vessels. Has a role in development of dorsal root ganglia. Acts as a Wnt7-specific coactivator of canonical Wnt signaling: required to deliver reck-bound Wnt7 to frizzled by assembling a higher-order RECK-ADGRA2-Fzd-LRP5-LRP6 co [...] (1367 aa)
twistnbDNA-directed RNA polymerase I subunit RPA43; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase I which synthesizes ribosomal RNA precursors. May be involved in recruitment of Pol I to rDNA promoters (By similarity). (390 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2563 aa)
ptenaPhosphatase and tensin homolog A; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (467 aa)
auts2aActivator of transcription and developmental regulator AUTS2 a. (1278 aa)
rab11fip4aRab11 family-interacting protein 4A; Acts as a regulator of endocytic traffic by participating in membrane delivery. Required for the abcission step in cytokinesis, possibly by acting as an 'address tag' delivering recycling endosome membranes to the cleavage furrow during late cytokinesis (By similarity). May play a role in differentiation during retinal development. (621 aa)
slc33a1Solute carrier family 33 member 1. (541 aa)
pard3abPar-3 family cell polarity regulator alpha, b. (1332 aa)
fshbFollicle-stimulating hormone beta subunit. (130 aa)
gnl3Guanine nucleotide-binding protein-like 3; May play a role in regulating cellular proliferation. (561 aa)
cluClusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. (449 aa)
gle1Nucleoporin GLE1; Required for the export of mRNAs containing poly(A) tails from the nucleus into the cytoplasm. May be involved in the terminal step of the mRNA transport through the nuclear pore complex (NPC) (By similarity). (694 aa)
loxaLysyl oxidase a. (408 aa)
fbxw7F-box and WD repeat domain-containing 7. (544 aa)
grnaGranulin a. (1049 aa)
ccnkCyclin-K; Regulatory subunit of cyclin-dependent kinases that mediates activation of target kinases. Plays a role in transcriptional regulation via its role in regulating the phosphorylation of the C- terminal domain (CTD) of the large subunit of RNA polymerase II (POLR2A). (526 aa)
htr1ab5-hydroxytryptamine (serotonin) receptor 1A b. (413 aa)
med23Mediator of RNA polymerase II transcription subunit 23; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (1387 aa)
ppp1r12aProtein phosphatase 1 regulatory subunit 12A; Regulates myosin phosphatase activity. (1117 aa)
col1a2Collagen, type I, alpha 2. (1352 aa)
dnaaf3Dynein assembly factor 3, axonemal; Required for the assembly of axonemal inner and outer dynein arms. Involved in preassembly of dyneins into complexes before their transport into cilia; Belongs to the DNAAF3 family. (469 aa)
il7rInterleukin 7 receptor. (372 aa)
vegfabVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (251 aa)
prpf8Pre-mRNA-processing factor 8. (2342 aa)
l1cambNeural cell adhesion molecule L1.1; Cell adhesion molecule with an important role in the development of the nervous system. Involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc. Binds to axonin on neurons (By similarity); Belongs to the immunoglobulin superfamily. L1/neurofascin/NgCAM family. (1332 aa)
sox11bTranscription factor SOX. (368 aa)
fut8aAlpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family. (581 aa)
otpaOrthopedia homeobox a. (332 aa)
pitpnaaPhosphatidylinositol transfer protein, alpha a. (271 aa)
col17a1aCollagen, type XVII, alpha 1a. (1408 aa)
cenphCentromere protein H. (233 aa)
lrrk2Leucine-rich repeat kinase 2. (2532 aa)
als2bAlsin Rho guanine nucleotide exchange factor ALS2 b. (1681 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1098 aa)
pla2g6Phospholipase A2, group VI (cytosolic, calcium-independent). (824 aa)
cntnap1Contactin-associated protein 1. (1309 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
slc6a6bTransporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (574 aa)
psd2Pleckstrin and Sec7 domain-containing 2. (837 aa)
dnaaf4Dynein axonemal assembly factor 4. (420 aa)
ptpn12Protein tyrosine phosphatase non-receptor type 12. (170 aa)
mib1E3 ubiquitin-protein ligase mib1; E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. It thereby participates in many processes regulated by the Notch signaling pathway, such as midline cell fate specification prior to germ layer formation, patterning of sensory cell differentiation in the ear, neurogenesis of the hindbrain and commitment to a secretory fate in the intesti [...] (1041 aa)
agrnAgrin. (1926 aa)
cfap53Cilia- and flagella-associated protein 53; May play a role in the beating of primary cilia and thereby be involved in the establishment of organ laterality during embryogenesis; Belongs to the CFAP53 family. (519 aa)
wnt5bProtein Wnt-5b; Ligand for members of the frizzled family of seven transmembrane receptors. Can activate or inhibit canonical Wnt signaling, depending on receptor context. Required during embryogenesis for extension of the primary anterior-posterior axis. (363 aa)
ap1g2AP-1 complex subunit gamma. (794 aa)
gabra1Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (459 aa)
psen1Presenilin-1; Catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (amyloid- beta precursor protein). Requires the presence of the other members of the gamma-secretase complex for protease activity. Plays a role in Notch and Wnt signaling cascades and regulation of downstream processes via its role in processing key regulatory proteins (By similarity); Belongs to the peptidase A22A family. (456 aa)
rtn4bReticulon. (876 aa)
trip4Thyroid hormone receptor interactor 4. (564 aa)
cdh1Cadherin 1, type 1, E-cadherin (epithelial); Cadherins are calcium-dependent cell adhesion proteins. (877 aa)
glrx2Glutaredoxin 2. (170 aa)
hmgcs13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (519 aa)
exosc3Exosome component 3. (247 aa)
drd4aDopamine receptor D4a; Belongs to the G-protein coupled receptor 1 family. (380 aa)
ptmabProthymosin alpha-B. (106 aa)
notch1aNeurogenic locus notch homolog protein 1; Functions as a receptor for membrane-bound ligands Jagged-1 (JAG1), Jagged-2 (JAG2) and Delta-1 (DLL1) to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Involved in the [...] (2438 aa)
dync1h1Dynein, cytoplasmic 1, heavy chain 1. (1765 aa)
thsd7aaThrombospondin type-1 domain-containing protein 7A; Required for normal sprouting angiogenesis and normal embryonic development of intersegmental vessels (ISV). Required for normal function of the glomerular filtration barrier. Required for normal axon outgrowth on embryonic motor neurons at the level of the horizontal myoseptum. Required for normal expression of notch1b, suggesting that its functions in angiogenesis and neuron outgrowth are due to decreased expression of notch1b. Plays a role in actin cytoskeleton rearrangement (By similarity). (1684 aa)
ap1g1AP-1 complex subunit gamma. (819 aa)
adgrg1Adhesion G protein-coupled receptor G1; Belongs to the G-protein coupled receptor 2 family. (648 aa)
etfaElectron-transfer-flavoprotein, alpha polypeptide. (333 aa)
evx1Even-skipped homeobox 1. (377 aa)
ndr2Nodal-related 2. (505 aa)
nptx2aNeuronal pentraxin 2a. (433 aa)
tmem33Transmembrane protein 33. (252 aa)
csf1raMacrophage colony-stimulating factor 1 receptor; Tyrosine-protein kinase that acts as cell-surface receptor for CSF1 and plays an essential role in the regulation of survival, proliferation and differentiation of hematopoietic precursor cells, especially mononuclear phagocytes, such as macrophages and monocytes. Plays an important role in innate immunity and in inflammatory processes. Plays an important role in the regulation of osteoclast proliferation and differentiation, the regulation of bone resorption, and is required for normal bone development. Promotes reorganization of the ac [...] (977 aa)
prmt8bProtein arginine N-methyltransferase 8-B; S-adenosyl-L-methionine-dependent and membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. PRMT8 subfamily. (420 aa)
bmp1aMetalloendopeptidase. (986 aa)
rragaRas-related GTP-binding A. (316 aa)
gdpd5aGlycerophosphodiester phosphodiesterase domain-containing 5a. (621 aa)
nkx2.2aHomeobox protein Nkx-2.2a; Transcriptional activator involved in the development of insulin-producting beta cells in the endocrine pancreas (By similarity). May also be involved in specifying diencephalic neuromeric boundaries, and in controlling the expression of genes that play a role in axonal guidance. Binds to elements within the NEUROD1 promoter (By similarity). (273 aa)
tfebTranscription factor EB. (493 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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