STRINGSTRING
AGB31048.1 AGB31048.1 AGB30838.1 AGB30838.1 AGB30815.1 AGB30815.1 glmS glmS AGB30654.1 AGB30654.1 AGB30616.1 AGB30616.1 AGB30447.1 AGB30447.1 AGB30446.1 AGB30446.1 AGB30236.1 AGB30236.1 AGB30216.1 AGB30216.1 mer mer AGB30103.1 AGB30103.1 AGB29976.1 AGB29976.1 AGB33587.1 AGB33587.1 AGB33550.1 AGB33550.1 AGB33417.1 AGB33417.1 AGB33337.1 AGB33337.1 AGB33243.1 AGB33243.1 AGB33234.1 AGB33234.1 AGB33202.1 AGB33202.1 AGB33171.1 AGB33171.1 AGB32859.1 AGB32859.1 AGB32858.1 AGB32858.1 AGB32857.1 AGB32857.1 AGB32856.1 AGB32856.1 AGB32853.1 AGB32853.1 AGB32852.1 AGB32852.1 AGB32850.1 AGB32850.1 AGB32730.1 AGB32730.1 AGB32637.1 AGB32637.1 AGB32622.1 AGB32622.1 AGB32445.1 AGB32445.1 AGB32444.1 AGB32444.1 AGB32443.1 AGB32443.1 glmS-3 glmS-3 glmE glmE AGB32398.1 AGB32398.1 AGB32306.1 AGB32306.1 AGB32258.1 AGB32258.1 AGB32200.1 AGB32200.1 fumC fumC AGB32078.1 AGB32078.1 AGB32073.1 AGB32073.1 AGB31957.1 AGB31957.1 AGB31926.1 AGB31926.1 AGB31863.1 AGB31863.1 AGB31764.1 AGB31764.1 sucD sucD sucC sucC AGB31374.1 AGB31374.1 AGB31373.1 AGB31373.1 AGB31352.1 AGB31352.1 AGB31349.1 AGB31349.1 AGB31256.1 AGB31256.1 AGB31255.1 AGB31255.1 AGB31254.1 AGB31254.1 AGB31053.1 AGB31053.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB31048.1Flavin-dependent dehydrogenase; PFAM: FAD binding domain. (557 aa)
AGB30838.1PFAM: Luciferase-like monooxygenase; TIGRFAM: coenzyme F420-dependent oxidoreductase, NP1902A family. (333 aa)
AGB30815.1Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (826 aa)
glmSMethylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (148 aa)
AGB30654.1PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II. (382 aa)
AGB30616.1PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family; probable F420-dependent oxidoreductase, Rv1855c family. (330 aa)
AGB30447.1PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase-type oxidoreductase, BA3436 family. (307 aa)
AGB30446.1Aconitate hydratase, putative, Aquifex type; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type. (657 aa)
AGB30236.1Putative dehydrogenase; PFAM: FAD dependent oxidoreductase. (460 aa)
AGB30216.1Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (822 aa)
merFlavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT. (335 aa)
AGB30103.1PFAM: Polysulphide reductase, NrfD. (443 aa)
AGB29976.1Fe-S oxidoreductase; PFAM: Cysteine-rich domain; 4Fe-4S binding domain. (728 aa)
AGB33587.1PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily. (304 aa)
AGB33550.1Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I. (774 aa)
AGB33417.1NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus. (498 aa)
AGB33337.1PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family. (329 aa)
AGB33243.1PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type. (420 aa)
AGB33234.1Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase. (327 aa)
AGB33202.1PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family. (290 aa)
AGB33171.1Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I. (593 aa)
AGB32859.1PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N. (508 aa)
AGB32858.1Proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M. (507 aa)
AGB32857.1Proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L. (685 aa)
AGB32856.1NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L. (101 aa)
AGB32853.1TIGRFAM: NADH-quinone oxidoreductase, chain I. (153 aa)
AGB32852.1NADH:ubiquinone oxidoreductase subunit 1 (chain H); PFAM: NADH dehydrogenase. (365 aa)
AGB32850.1PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family. (235 aa)
AGB32730.1PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1. (342 aa)
AGB32637.1PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain. (138 aa)
AGB32622.1Putative membrane protein; PFAM: Protein of unknown function (DUF420). (201 aa)
AGB32445.1TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (290 aa)
AGB32444.1Succinate dehydrogenase, hydrophobic anchor subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit. (121 aa)
AGB32443.1Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit. (142 aa)
glmS-3Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (146 aa)
glmEMethylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (481 aa)
AGB32398.1PFAM: HpcH/HpaI aldolase/citrate lyase family. (347 aa)
AGB32306.1Aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1. (920 aa)
AGB32258.1acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain. (703 aa)
AGB32200.1PFAM: Polysulphide reductase, NrfD. (450 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (471 aa)
AGB32078.1PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II. (255 aa)
AGB32073.1Heme/copper-type cytochrome/quinol oxidase, subunit 3; PFAM: Cytochrome c oxidase subunit III. (299 aa)
AGB31957.1PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily. (322 aa)
AGB31926.1PFAM: Luciferase-like monooxygenase; TIGRFAM: coenzyme F420-dependent oxidoreductase, NP1902A family. (335 aa)
AGB31863.1PFAM: Phosphoenolpyruvate carboxylase. (896 aa)
AGB31764.1PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain. (138 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (383 aa)
AGB31374.1Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase. (474 aa)
AGB31373.1PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB). (333 aa)
AGB31352.1NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains. (818 aa)
AGB31349.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (554 aa)
AGB31256.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (618 aa)
AGB31255.1NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains. (639 aa)
AGB31254.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N. (541 aa)
AGB31053.1Putative membrane protein; PFAM: Protein of unknown function (DUF420). (187 aa)
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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