STRINGSTRING
ribL ribL AGB30007.1 AGB30007.1 ileS ileS AGB30029.1 AGB30029.1 AGB30036.1 AGB30036.1 AGB30091.1 AGB30091.1 leuS leuS trpS trpS AGB30246.1 AGB30246.1 AGB30272.1 AGB30272.1 AGB30321.1 AGB30321.1 AGB30322.1 AGB30322.1 lysK lysK AGB30379.1 AGB30379.1 AGB30463.1 AGB30463.1 AGB30464.1 AGB30464.1 AGB30466.1 AGB30466.1 AGB30478.1 AGB30478.1 valS valS AGB30570.1 AGB30570.1 AGB30574.1 AGB30574.1 AGB30580.1 AGB30580.1 AGB30581.1 AGB30581.1 AGB30651.1 AGB30651.1 argS argS AGB30709.1 AGB30709.1 AGB30726.1 AGB30726.1 tyrS tyrS AGB30869.1 AGB30869.1 AGB31049.1 AGB31049.1 AGB31050.1 AGB31050.1 AGB31132.1 AGB31132.1 AGB31170.1 AGB31170.1 AGB31269.1 AGB31269.1 AGB31360.1 AGB31360.1 AGB31363.1 AGB31363.1 AGB31385.1 AGB31385.1 gltX gltX AGB31741.1 AGB31741.1 AGB31789.1 AGB31789.1 AGB31853.1 AGB31853.1 AGB31854.1 AGB31854.1 AGB31855.1 AGB31855.1 AGB31856.1 AGB31856.1 AGB31971.1 AGB31971.1 AGB32007.1 AGB32007.1 AGB32069.1 AGB32069.1 AGB32091.1 AGB32091.1 AGB32092.1 AGB32092.1 AGB32101.1 AGB32101.1 cysS cysS AGB32128.1 AGB32128.1 AGB32204.1 AGB32204.1 AGB32243.1 AGB32243.1 thiI thiI AGB32378.1 AGB32378.1 AGB32414.1 AGB32414.1 AGB32481.1 AGB32481.1 AGB32487.1 AGB32487.1 AGB32488.1 AGB32488.1 AGB32537.1 AGB32537.1 AGB32620.1 AGB32620.1 queC queC AGB32829.1 AGB32829.1 AGB32993.1 AGB32993.1 AGB33061.1 AGB33061.1 metG metG guaAB guaAB nadE nadE AGB33275.1 AGB33275.1 argG argG AGB33467.1 AGB33467.1 AGB33591.1 AGB33591.1 ribL-2 ribL-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ribLCytidyltransferase-related enzyme; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (142 aa)
AGB30007.1PFAM: Universal stress protein family. (141 aa)
ileSisoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1088 aa)
AGB30029.1PFAM: Universal stress protein family. (131 aa)
AGB30036.1PFAM: Universal stress protein family. (151 aa)
AGB30091.1TIGR00268 family protein; PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein. (281 aa)
leuSPFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family. (882 aa)
trpStryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). (526 aa)
AGB30246.1PFAM: Universal stress protein family. (140 aa)
AGB30272.1NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase. (296 aa)
AGB30321.1Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain. (318 aa)
AGB30322.1Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain. (263 aa)
lysKPFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete; Belongs to the class-I aminoacyl-tRNA synthetase family. (570 aa)
AGB30379.1TRNA methyltransferase; PFAM: Asparagine synthase. (196 aa)
AGB30463.1PFAM: Universal stress protein family. (153 aa)
AGB30464.1PFAM: Universal stress protein family. (152 aa)
AGB30466.1PFAM: Universal stress protein family. (123 aa)
AGB30478.1PFAM: FAD binding domain of DNA photolyase; DNA photolyase. (463 aa)
valSvalyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily. (900 aa)
AGB30570.1PFAM: Universal stress protein family. (138 aa)
AGB30574.1PFAM: Universal stress protein family. (147 aa)
AGB30580.1PFAM: Universal stress protein family. (153 aa)
AGB30581.1PFAM: Universal stress protein family. (154 aa)
AGB30651.1PFAM: Universal stress protein family. (145 aa)
argSarginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (595 aa)
AGB30709.1PFAM: Universal stress protein family. (144 aa)
AGB30726.1PFAM: PP-loop family; TIGRFAM: TIGR00269 family protein. (319 aa)
tyrStyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily. (331 aa)
AGB30869.1PFAM: Universal stress protein family. (158 aa)
AGB31049.1Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain. (503 aa)
AGB31050.1Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain. (307 aa)
AGB31132.1PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain. (155 aa)
AGB31170.1PFAM: Universal stress protein family. (140 aa)
AGB31269.1PFAM: Universal stress protein family. (127 aa)
AGB31360.1PFAM: Universal stress protein family. (141 aa)
AGB31363.1PFAM: Universal stress protein family. (146 aa)
AGB31385.1PFAM: Universal stress protein family. (281 aa)
gltXglutamyl-tRNA synthetase, archaeal and eukaryotic family; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (580 aa)
AGB31741.1PFAM: Universal stress protein family. (272 aa)
AGB31789.1Hypothetical protein; Manually curated. (109 aa)
AGB31853.1PFAM: Universal stress protein family. (142 aa)
AGB31854.1PFAM: Universal stress protein family. (304 aa)
AGB31855.1PFAM: Universal stress protein family. (133 aa)
AGB31856.1Hypothetical protein. (164 aa)
AGB31971.1PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family. (323 aa)
AGB32007.1PFAM: Universal stress protein family. (292 aa)
AGB32069.1PFAM: Universal stress protein family. (143 aa)
AGB32091.1PFAM: Universal stress protein family. (136 aa)
AGB32092.1PFAM: Universal stress protein family. (158 aa)
AGB32101.1PFAM: FAD binding domain of DNA photolyase; DNA photolyase. (467 aa)
cysSPFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase. (499 aa)
AGB32128.1PFAM: Universal stress protein family. (165 aa)
AGB32204.1PFAM: Asparagine synthase. (380 aa)
AGB32243.1PFAM: Universal stress protein family. (140 aa)
thiIThiamine biosynthesis ATP pyrophosphatase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (392 aa)
AGB32378.1PFAM: Universal stress protein family. (298 aa)
AGB32414.1PFAM: Universal stress protein family. (205 aa)
AGB32481.1PFAM: Universal stress protein family. (156 aa)
AGB32487.1PFAM: Universal stress protein family. (166 aa)
AGB32488.1PFAM: Universal stress protein family. (161 aa)
AGB32537.1NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase. (283 aa)
AGB32620.1PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family. (895 aa)
queCQueuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (242 aa)
AGB32829.1PFAM: Asparagine synthase. (567 aa)
AGB32993.1PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain. (172 aa)
AGB33061.1PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain; TIGR00289 family protein; arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. (241 aa)
metGmethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (698 aa)
guaABGMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP. (305 aa)
nadENAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (264 aa)
AGB33275.1PFAM: Universal stress protein family. (142 aa)
argGPFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (405 aa)
AGB33467.1PFAM: Universal stress protein family. (139 aa)
AGB33591.1PFAM: Universal stress protein family. (145 aa)
ribL-2Cytidyltransferase-related enzyme; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (163 aa)
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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