STRINGSTRING
AGB30299.1 AGB30299.1 AGB30300.1 AGB30300.1 AGB30301.1 AGB30301.1 AGB30302.1 AGB30302.1 AGB30527.1 AGB30527.1 AGB30528.1 AGB30528.1 AGB30529.1 AGB30529.1 AGB30752.1 AGB30752.1 AGB30753.1 AGB30753.1 AGB30754.1 AGB30754.1 AGB30755.1 AGB30755.1 AGB30756.1 AGB30756.1 secY secY AGB31060.1 AGB31060.1 trpE trpE AGB31258.1 AGB31258.1 AGB31259.1 AGB31259.1 AGB31260.1 AGB31260.1 AGB31261.1 AGB31261.1 AGB31300.1 AGB31300.1 AGB31469.1 AGB31469.1 AGB31470.1 AGB31470.1 AGB31766.1 AGB31766.1 AGB31791.1 AGB31791.1 AGB31792.1 AGB31792.1 AGB31793.1 AGB31793.1 AGB31984.1 AGB31984.1 AGB32106.1 AGB32106.1 AGB32415.1 AGB32415.1 AGB32476.1 AGB32476.1 AGB32543.1 AGB32543.1 AGB32545.1 AGB32545.1 AGB32774.1 AGB32774.1 AGB32775.1 AGB32775.1 AGB32776.1 AGB32776.1 AGB32777.1 AGB32777.1 AGB32778.1 AGB32778.1 AGB32797.1 AGB32797.1 AGB32798.1 AGB32798.1 AGB32799.1 AGB32799.1 AGB32800.1 AGB32800.1 AGB32801.1 AGB32801.1 AGB33048.1 AGB33048.1 AGB33049.1 AGB33049.1 AGB33293.1 AGB33293.1 AGB33330.1 AGB33330.1 AGB33335.1 AGB33335.1 AGB33368.1 AGB33368.1 srp54 srp54 ftsY ftsY AGB33569.1 AGB33569.1 AGB33570.1 AGB33570.1 AGB33571.1 AGB33571.1 AGB33572.1 AGB33572.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB30299.1ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain. (337 aa)
AGB30300.1ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component. (319 aa)
AGB30301.1ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (306 aa)
AGB30302.1ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (381 aa)
AGB30527.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (444 aa)
AGB30528.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (445 aa)
AGB30529.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (446 aa)
AGB30752.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (438 aa)
AGB30753.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (444 aa)
AGB30754.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (331 aa)
AGB30755.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (353 aa)
AGB30756.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (531 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (486 aa)
AGB31060.1PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. (215 aa)
trpEAnthranilate synthase component I, archaeal clade; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate a [...] (560 aa)
AGB31258.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (514 aa)
AGB31259.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (316 aa)
AGB31260.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (302 aa)
AGB31261.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (699 aa)
AGB31300.1Glycosyl transferase. (480 aa)
AGB31469.1Subtilisin-like serine protease; PFAM: Subtilase family. (543 aa)
AGB31470.1Subtilisin-like serine protease; PFAM: Subtilase family. (557 aa)
AGB31766.1Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family. (476 aa)
AGB31791.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (699 aa)
AGB31792.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (306 aa)
AGB31793.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (331 aa)
AGB31984.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (530 aa)
AGB32106.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (404 aa)
AGB32415.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (522 aa)
AGB32476.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (525 aa)
AGB32543.1PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (607 aa)
AGB32545.1PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (590 aa)
AGB32774.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (446 aa)
AGB32775.1PFAM: Branched-chain amino acid transport system / permease component. (299 aa)
AGB32776.1PFAM: Branched-chain amino acid transport system / permease component. (363 aa)
AGB32777.1PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (242 aa)
AGB32778.1ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter. (239 aa)
AGB32797.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (450 aa)
AGB32798.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (445 aa)
AGB32799.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (577 aa)
AGB32800.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (342 aa)
AGB32801.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (590 aa)
AGB33048.1Aminodeoxychorismate synthase, component I, clade 2; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, clade 2. (534 aa)
AGB33049.1PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. (236 aa)
AGB33293.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (522 aa)
AGB33330.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (525 aa)
AGB33335.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme. (524 aa)
AGB33368.1AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme. (652 aa)
srp54Signal recognition particle GTPase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (463 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (539 aa)
AGB33569.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (525 aa)
AGB33570.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (333 aa)
AGB33571.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (342 aa)
AGB33572.1PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain. (386 aa)
Your Current Organism:
Natrinema pellirubrum
NCBI taxonomy Id: 797303
Other names: N. pellirubrum DSM 15624, Natrinema pellirubrum DSM 15624, Natrinema pellirubrum JCM 10476, Natrinema pellirubrum NCIMB 786, Natrinema pellirubrum str. DSM 15624, Natrinema pellirubrum strain DSM 15624
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