STRINGSTRING
CSKR_7251s CSKR_7251s CSKR_428s CSKR_428s blm blm Top3a Top3a Nbn Nbn cep44 cep44 RAD54B RAD54B Rtel1 Rtel1 Ccdc94 Ccdc94 ficd ficd CTTNBP2 CTTNBP2 CSKR_3979s CSKR_3979s obfc1 obfc1 Sugp1 Sugp1 SASS6 SASS6 pif1 pif1 RAD50 RAD50 CSKR_5118s CSKR_5118s CLF_106340 CLF_106340 MRE11A MRE11A CLF_102744 CLF_102744 TOPBP1 TOPBP1 Cnp Cnp rpa1-2 rpa1-2 CSKR_9159s CSKR_9159s CSKR_7489s CSKR_7489s TOP3B TOP3B RECQL4 RECQL4 BRCA1 BRCA1 RAD51 RAD51 rad51-a rad51-a SLC4A1AP SLC4A1AP BRIP1 BRIP1 Ppil3 Ppil3 Atrx Atrx CSKR_12724s CSKR_12724s MEIOB MEIOB BARD1 BARD1 Recql5 Recql5 RAD54L RAD54L CSKR_11193s CSKR_11193s RAD51C RAD51C ATM ATM CSKR_12502s CSKR_12502s CSKR_4331s CSKR_4331s RPA2 RPA2 Brca2 Brca2 DDX52 DDX52 Mus81 Mus81 CSKR_13099s CSKR_13099s PWWP2A PWWP2A N4bp2l2 N4bp2l2 PRKRIP1 PRKRIP1 CSKR_7352s CSKR_7352s
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSKR_7251sUncharacterized protein. (384 aa)
CSKR_428sUncharacterized protein. (284 aa)
blmBloom syndrome-like protein. (1050 aa)
Top3aDNA topoisomerase 3-alpha. (1447 aa)
NbnNibrin. (1010 aa)
cep44Centrosomal protein of 44 kDa. (711 aa)
RAD54BDNA repair and recombination protein RAD54B. (1076 aa)
Rtel1Regulator of telomere elongation helicase 1. (892 aa)
Ccdc94Coiled-coil domain-containing protein 94. (904 aa)
ficdAdenosine monophosphate-protein transferase FICD. (1702 aa)
CTTNBP2Cortactin-binding protein 2. (186 aa)
CSKR_3979sUncharacterized protein. (123 aa)
obfc1CST complex subunit STN1. (602 aa)
Sugp1SURP and G-patch domain-containing protein 1. (1185 aa)
SASS6Spindle assembly abnormal protein 6-like protein. (439 aa)
pif1ATP-dependent DNA helicase; Belongs to the helicase family. (802 aa)
RAD50DNA repair protein RAD50. (1083 aa)
CSKR_5118sUncharacterized protein. (249 aa)
CLF_106340Uncharacterized protein. (359 aa)
MRE11ADouble-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (756 aa)
CLF_102744DNA polymerase. (1128 aa)
TOPBP1Topoisomerase (DNA) II binding protein 1. (1450 aa)
Cnp2' 3'-cyclic-nucleotide 3'-phosphodiesterase. (543 aa)
rpa1-2Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (560 aa)
CSKR_9159sUncharacterized protein. (387 aa)
CSKR_7489sUncharacterized protein. (250 aa)
TOP3BDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (988 aa)
RECQL4ATP-dependent DNA helicase Q4. (1241 aa)
BRCA1Breast cancer type 1 susceptibility-like protein. (1125 aa)
RAD51DNA repair protein RAD51-like protein 1. (225 aa)
rad51-aDNA repair protein RAD51-like protein A; Belongs to the RecA family. (190 aa)
SLC4A1APKanadaptin. (744 aa)
BRIP1Fanconi anemia group J protein. (543 aa)
Ppil3Peptidyl-prolyl cis-trans isomerase-like 3. (73 aa)
AtrxTranscriptional regulator ATRX. (2223 aa)
CSKR_12724sUncharacterized protein. (510 aa)
MEIOBMeiosis-specific with OB domain-containing protein. (476 aa)
BARD1BRCA1-associated RING domain protein 1. (1184 aa)
Recql5ATP-dependent DNA helicase Q5. (1065 aa)
RAD54LDNA repair and recombination-like protein. (733 aa)
CSKR_11193sGLOBIN domain-containing protein; Belongs to the globin family. (146 aa)
RAD51CDNA repair protein RAD51-like protein 3. (957 aa)
ATMSerine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (3362 aa)
CSKR_12502sUncharacterized protein. (58 aa)
CSKR_4331sUncharacterized protein. (318 aa)
RPA2Replication protein A 32 kDa subunit. (263 aa)
Brca2Breast cancer type 2 susceptibility-like protein. (1792 aa)
DDX52Putative ATP-dependent RNA helicase DDX52. (525 aa)
Mus81Crossover junction endonuclease MUS81. (525 aa)
CSKR_13099sUncharacterized protein. (81 aa)
PWWP2APWWP domain-containing protein 2A. (1416 aa)
N4bp2l2NEDD4-binding protein 2-like 2. (888 aa)
PRKRIP1PRKR-interacting protein 1. (170 aa)
CSKR_7352sReverse transcriptase domain-containing protein. (1030 aa)
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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