16 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5K7M8_ASTMX	Uncharacterized protein. (997 aa)
	W5KGH2_ASTMX	Receptor protein-tyrosine kinase. (953 aa)
	LOC103043830	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	epha2	Eph receptor A2 b. (983 aa)
	epha7	Eph receptor A7. (994 aa)
	LOC103046288	Eph receptor A2 a. (987 aa)
	epha5	Uncharacterized protein. (986 aa)
	LOC103042500	Ephrin-A3a; Belongs to the ephrin family. (224 aa)
	efnb1	Ephrin-B1; Belongs to the ephrin family. (344 aa)
	ENSAMXP00000041947	Si:dkey-246i14.3; Belongs to the ephrin family. (270 aa)
	LOC103046441	Ephrin-A2a; Belongs to the ephrin family. (199 aa)
	efna5	Ephrin-A5b; Belongs to the ephrin family. (230 aa)
	ephb2	Eph receptor B2a. (999 aa)
	LOC103028810	Ephrin-A5a; Belongs to the ephrin family. (234 aa)
	efna3	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (246 aa)
	LOC103021450	Ephrin-A1b; Belongs to the ephrin family. (233 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000041947	LOC103046288	ENSAMXP00000041947	ENSAMXP00000017527	Si:dkey-246i14.3; Belongs to the ephrin family.	Eph receptor A2 a.	0.916
ENSAMXP00000041947	W5K7M8_ASTMX	ENSAMXP00000041947	ENSAMXP00000003589	Si:dkey-246i14.3; Belongs to the ephrin family.	Uncharacterized protein.	0.664
ENSAMXP00000041947	W5KGH2_ASTMX	ENSAMXP00000041947	ENSAMXP00000006684	Si:dkey-246i14.3; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.644
ENSAMXP00000041947	efnb1	ENSAMXP00000041947	ENSAMXP00000037283	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin-B1; Belongs to the ephrin family.	0.456
ENSAMXP00000041947	epha2	ENSAMXP00000041947	ENSAMXP00000012838	Si:dkey-246i14.3; Belongs to the ephrin family.	Eph receptor A2 b.	0.905
ENSAMXP00000041947	epha5	ENSAMXP00000041947	ENSAMXP00000021869	Si:dkey-246i14.3; Belongs to the ephrin family.	Uncharacterized protein.	0.599
ENSAMXP00000041947	epha7	ENSAMXP00000041947	ENSAMXP00000014810	Si:dkey-246i14.3; Belongs to the ephrin family.	Eph receptor A7.	0.713
ENSAMXP00000041947	ephb2	ENSAMXP00000041947	ENSAMXP00000048629	Si:dkey-246i14.3; Belongs to the ephrin family.	Eph receptor B2a.	0.602
LOC103021450	LOC103028810	ENSAMXP00000052525	ENSAMXP00000052157	Ephrin-A1b; Belongs to the ephrin family.	Ephrin-A5a; Belongs to the ephrin family.	0.403
LOC103021450	LOC103042500	ENSAMXP00000052525	ENSAMXP00000035812	Ephrin-A1b; Belongs to the ephrin family.	Ephrin-A3a; Belongs to the ephrin family.	0.417
LOC103021450	LOC103046288	ENSAMXP00000052525	ENSAMXP00000017527	Ephrin-A1b; Belongs to the ephrin family.	Eph receptor A2 a.	0.961
LOC103021450	W5K7M8_ASTMX	ENSAMXP00000052525	ENSAMXP00000003589	Ephrin-A1b; Belongs to the ephrin family.	Uncharacterized protein.	0.712
LOC103021450	W5KGH2_ASTMX	ENSAMXP00000052525	ENSAMXP00000006684	Ephrin-A1b; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.645
LOC103021450	efna3	ENSAMXP00000052525	ENSAMXP00000052356	Ephrin-A1b; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.426
LOC103021450	efna5	ENSAMXP00000052525	ENSAMXP00000046502	Ephrin-A1b; Belongs to the ephrin family.	Ephrin-A5b; Belongs to the ephrin family.	0.403
LOC103021450	epha2	ENSAMXP00000052525	ENSAMXP00000012838	Ephrin-A1b; Belongs to the ephrin family.	Eph receptor A2 b.	0.943
LOC103021450	epha5	ENSAMXP00000052525	ENSAMXP00000021869	Ephrin-A1b; Belongs to the ephrin family.	Uncharacterized protein.	0.565
LOC103021450	epha7	ENSAMXP00000052525	ENSAMXP00000014810	Ephrin-A1b; Belongs to the ephrin family.	Eph receptor A7.	0.712
LOC103021450	ephb2	ENSAMXP00000052525	ENSAMXP00000048629	Ephrin-A1b; Belongs to the ephrin family.	Eph receptor B2a.	0.597
LOC103028810	LOC103021450	ENSAMXP00000052157	ENSAMXP00000052525	Ephrin-A5a; Belongs to the ephrin family.	Ephrin-A1b; Belongs to the ephrin family.	0.403