STRINGSTRING
smc3 smc3 W5KDX2_ASTMX W5KDX2_ASTMX nipbl nipbl LOC103044077 LOC103044077 W5KX19_ASTMX W5KX19_ASTMX LOC103030832 LOC103030832 smc1a smc1a W5LMH3_ASTMX W5LMH3_ASTMX rad21 rad21 stag1 stag1 Wapl Wapl LOC103039334 LOC103039334 pds5a pds5a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smc3Structural maintenance of chromosomes protein. (1217 aa)
W5KDX2_ASTMXStromal antigen 2b. (1226 aa)
nipblNipped-B protein. (2745 aa)
LOC103044077Stromal antigen 2a. (1255 aa)
W5KX19_ASTMXPDS5 cohesin associated factor B. (1162 aa)
LOC103030832RAD21 cohesin complex component like 1. (550 aa)
smc1aStructural maintenance of chromosomes protein. (1231 aa)
W5LMH3_ASTMXStructural maintenance of chromosomes protein. (1229 aa)
rad21RAD21 cohesin complex component b. (636 aa)
stag1Stromal antigen 1b. (1257 aa)
WaplWAPL cohesin release factor b. (1208 aa)
LOC103039334RAD21 cohesin complex component a. (637 aa)
pds5aPDS5 cohesin associated factor A. (1413 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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