STRINGSTRING
Rpl39 Rpl39 habp4 habp4 RPL3L RPL3L LOC103029614 LOC103029614 srp72 srp72 rpl5 rpl5 kcna4 kcna4 rpl13 rpl13 eef2 eef2 LOC103023967 LOC103023967 LOC103026953 LOC103026953 LOC103024674 LOC103024674 LOC103021498 LOC103021498 ttc37 ttc37 wdr61 wdr61 W5KRY6_ASTMX W5KRY6_ASTMX srp9 srp9 Rps9 Rps9 LOC103035173 LOC103035173 skiv2l skiv2l W5KYZ2_ASTMX W5KYZ2_ASTMX rpl7a rpl7a rpl6 rpl6 rps4x rps4x rps3 rps3 W5L5K2_ASTMX W5L5K2_ASTMX KCNG3 KCNG3 Rpl24 Rpl24 LOC103042196 LOC103042196 rps21 rps21 LOC103026355 LOC103026355 W5LEP7_ASTMX W5LEP7_ASTMX RPL38 RPL38 Rps15 Rps15 rps14 rps14 LOC103029695 LOC103029695 W5LNX5_ASTMX W5LNX5_ASTMX rps3a rps3a rpl29 rpl29 Kcns3 Kcns3 KCNS2 KCNS2 Tpt1 Tpt1 srprb srprb ENSAMXP00000027880 ENSAMXP00000027880 rpl32 rpl32 SERBP1 SERBP1 LOC103034598 LOC103034598 rpl14 rpl14 Rpl17 Rpl17 LOC111189478 LOC111189478 ifi35 ifi35 LOC103029731 LOC103029731 Vezt Vezt ENSAMXP00000031311 ENSAMXP00000031311 Rplp2 Rplp2 Rsad1 Rsad1 ENSAMXP00000032768 ENSAMXP00000032768 rpl9 rpl9 rpl28 rpl28 LOC103040850 LOC103040850 rplp1 rplp1 LOC103044018 LOC103044018 rpl10a rpl10a ENSAMXP00000034905 ENSAMXP00000034905 Eif5b Eif5b rps7 rps7 ENSAMXP00000035760 ENSAMXP00000035760 rps2 rps2 ENSAMXP00000036136 ENSAMXP00000036136 rps24 rps24 rpl21 rpl21 rps25 rps25 rpl7l1 rpl7l1 LOC103029414 LOC103029414 rpl34 rpl34 srp14 srp14 Rplp0 Rplp0 rpl18a rpl18a rpl18 rpl18 hbs1l hbs1l rps8 rps8 LOC103041134 LOC103041134 rpsa rpsa rps28 rps28 rps5 rps5 rps19 rps19 rpl27 rpl27 RPL27A RPL27A LOC103047485 LOC103047485 srp19 srp19 rpl19 rpl19 eef1g eef1g ccdc124 ccdc124 srp54 srp54 RPS17 RPS17 RPS20 RPS20 fau fau rpl7 rpl7 naca naca LOC103037628 LOC103037628 btf3 btf3 KCNB1 KCNB1 rpl37a rpl37a ENSAMXP00000044523 ENSAMXP00000044523 LOC103023602 LOC103023602 rpl12 rpl12 Srp68 Srp68 Rps18 Rps18 LOC103033914 LOC103033914 rpl8 rpl8 rpl30 rpl30 KCNQ4 KCNQ4 LOC103029008 LOC103029008 LOC103039794 LOC103039794 rpl31 rpl31 Eloa Eloa rps13 rps13 RPL37 RPL37 wdr31 wdr31 rpl4 rpl4 RPL35A RPL35A rpl15 rpl15 hmgn2 hmgn2 rps12 rps12 rpl13a rpl13a rps10 rps10 rpl22l1 rpl22l1 rpl11 rpl11 LOC103044042 LOC103044042 rps23 rps23 LOC103046684 LOC103046684 eef1b2 eef1b2 RPL19 RPL19 rpl22 rpl22 EDF1 EDF1 ENSAMXP00000051985 ENSAMXP00000051985 mrnip mrnip LOC103021491 LOC103021491 RSRC1 RSRC1 pelo pelo LOC103029379 LOC103029379 aknad1 aknad1 LOC103022137 LOC103022137 rps16 rps16 ENSAMXP00000053504 ENSAMXP00000053504 rps6 rps6 LOC103044954 LOC103044954 eef1d eef1d LOC103040128 LOC103040128 rpl36 rpl36 EIF5AL1 EIF5AL1 Ttc5 Ttc5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpl39Ribosomal protein L39. (50 aa)
habp4HABP4_PAI-RBP1 domain-containing protein. (452 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (472 aa)
LOC103029614Receptor for activated C kinase 1. (317 aa)
srp72Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (665 aa)
rpl5Ribosomal protein L5b. (296 aa)
kcna4Potassium voltage-gated channel, shaker-related subfamily, member 4; Belongs to the potassium channel family. (749 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
eef2Eukaryotic translation elongation factor 2b. (883 aa)
LOC103023967Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (126 aa)
LOC103026953High mobility group nucleosomal binding domain 7. (95 aa)
LOC103024674Ribosomal protein S17. (133 aa)
LOC103021498HTH cro/C1-type domain-containing protein. (147 aa)
ttc37Tetratricopeptide repeat domain 37. (1566 aa)
wdr61WD repeat domain 61. (305 aa)
W5KRY6_ASTMXSRP receptor subunit alpha. (584 aa)
srp9Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (86 aa)
Rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (136 aa)
LOC103035173SERPINE1 mRNA binding protein 1a. (420 aa)
skiv2lSKI2 homolog, superkiller viralicidic activity 2-like. (1249 aa)
W5KYZ2_ASTMXPhosphatase domain containing paladin 1b. (847 aa)
rpl7aRibosomal protein L7a. (274 aa)
rpl6Ribosomal protein L6. (260 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
W5L5K2_ASTMXRibosomal protein L37; Binds to the 23S rRNA. (97 aa)
KCNG3Uncharacterized protein; Belongs to the potassium channel family. (423 aa)
Rpl24Ribosomal protein L24. (156 aa)
LOC103042196Potassium voltage-gated channel, Shab-related subfamily, member 1; Belongs to the potassium channel family. (832 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
LOC103026355Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (450 aa)
W5LEP7_ASTMXValyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1203 aa)
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
Rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (144 aa)
rps14Ribosomal protein S14. (259 aa)
LOC103029695Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
W5LNX5_ASTMXDedicator of cytokinesis 4b; Belongs to the DOCK family. (1890 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (67 aa)
Kcns3Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3a; Belongs to the potassium channel family. (501 aa)
KCNS2Potassium voltage-gated channel modifier subfamily S member 2; Belongs to the potassium channel family. (477 aa)
Tpt1Tumor protein, translationally-controlled 1; Belongs to the TCTP family. (206 aa)
srprbSRP receptor subunit beta. (266 aa)
ENSAMXP00000027880Uncharacterized protein. (70 aa)
rpl32Ribosomal protein L32. (178 aa)
SERBP1HABP4_PAI-RBP1 domain-containing protein. (434 aa)
LOC103034598Death associated protein 1b. (111 aa)
rpl14Ribosomal protein L14. (142 aa)
Rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (224 aa)
LOC111189478Ribosomal protein L35a. (110 aa)
ifi35Interferon-induced protein 35. (371 aa)
LOC103029731Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (116 aa)
VeztVezatin, adherens junctions transmembrane protein. (812 aa)
ENSAMXP00000031311Ribosomal protein L10. (179 aa)
Rplp2Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
Rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (508 aa)
ENSAMXP00000032768Eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein). (274 aa)
rpl9Ribosomal protein L9. (193 aa)
rpl28Ribosomal protein L28. (153 aa)
LOC103040850High mobility group nucleosome binding domain 6. (96 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
LOC103044018Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
rpl10aRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
ENSAMXP00000034905Uncharacterized protein; Belongs to the potassium channel family. (479 aa)
Eif5bEukaryotic translation initiation factor 5B. (1233 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
ENSAMXP00000035760Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (118 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
ENSAMXP00000036136Si:dkey-43k4.5; Belongs to the potassium channel family. (506 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (175 aa)
rpl21Ribosomal protein L21. (160 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (136 aa)
rpl7l1Ribosomal protein L7-like 1. (283 aa)
LOC10302941440S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
rpl34Ribosomal protein L34. (117 aa)
srp14Signal recognition particle 14. (110 aa)
Rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (297 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
rpl18Ribosomal protein L18. (193 aa)
hbs1lHBS1-like translational GTPase. (690 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
LOC10304113440S ribosomal protein S27. (84 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (312 aa)
rps28Ribosomal protein S28. (69 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
rps19Ribosomal protein S19. (151 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (111 aa)
LOC103047485Uncharacterized protein. (142 aa)
srp19Signal recognition particle 19. (139 aa)
rpl19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
eef1gEukaryotic translation elongation factor 1 gamma. (441 aa)
ccdc124Coiled-coil domain containing 124. (215 aa)
srp54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
RPS17Ribosomal protein S17. (134 aa)
RPS20Ribosomal protein S20. (117 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
rpl7Ribosomal protein L7. (253 aa)
nacaNascent polypeptide associated complex subunit alpha. (1026 aa)
LOC103037628CD74 molecule, major histocompatibility complex, class II invariant chain a. (236 aa)
btf3Transcription factor BTF3; Belongs to the NAC-beta family. (162 aa)
KCNB1Potassium voltage-gated channel subfamily B member 1; Belongs to the potassium channel family. (822 aa)
rpl37aRibosomal protein L37a. (92 aa)
ENSAMXP00000044523Uncharacterized protein. (58 aa)
LOC103023602NAC alpha domain containing. (1962 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (170 aa)
Srp68Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (643 aa)
Rps18Ribosomal protein S18. (178 aa)
LOC103033914WD_REPEATS_REGION domain-containing protein. (317 aa)
rpl8Ribosomal protein L8. (257 aa)
rpl30Ribosomal protein L30. (117 aa)
KCNQ4Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family. (682 aa)
LOC103029008Ribosomal protein L5a. (303 aa)
LOC10303979440S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
rpl31Ribosomal protein L31. (125 aa)
EloaElongin A. (190 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (77 aa)
wdr31WD repeat domain 31. (342 aa)
rpl4Ribosomal protein L4. (376 aa)
RPL35ARibosomal protein L35a. (104 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
hmgn2High mobility group nucleosomal binding domain 2. (75 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
rps10Ribosomal protein S10. (166 aa)
rpl22l1Ribosomal protein L22-like 1. (126 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
LOC103044042NAD(P)-bd_dom domain-containing protein. (220 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
LOC10304668440S ribosomal protein S27. (95 aa)
eef1b2Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family. (225 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (256 aa)
rpl22Ribosomal protein L22. (129 aa)
EDF1Endothelial differentiation related factor 1. (148 aa)
ENSAMXP00000051985Potassium voltage-gated channel, KQT-like subfamily, member 2a; Belongs to the potassium channel family. (928 aa)
mrnipUncharacterized protein. (429 aa)
LOC103021491Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
RSRC1Arginine and serine rich coiled-coil 1. (322 aa)
peloProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (386 aa)
LOC103029379Potassium voltage-gated channel, KQT-like subfamily, member 5b; Belongs to the potassium channel family. (919 aa)
aknad1Uncharacterized protein. (1342 aa)
LOC103022137Eukaryotic translation initiation factor 5A. (156 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
ENSAMXP00000053504Transcription factor BTF3; Belongs to the NAC-beta family. (276 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
LOC10304495440S ribosomal protein S27. (101 aa)
eef1dEukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein). (592 aa)
LOC103040128Ribosomal protein L26. (145 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (177 aa)
EIF5AL1Eukaryotic translation initiation factor 5A like 1. (183 aa)
Ttc5Tetratricopeptide repeat domain 5. (476 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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