15 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PES1	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (546 aa)
	W5KBY5_ASTMX	Nucleolar complex protein 3 homolog. (650 aa)
	gnl3l	Guanine nucleotide binding protein-like 3 (nucleolar)-like. (552 aa)
	rsl1d1	Ribosomal L1 domain containing 1. (373 aa)
	BOP1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (633 aa)
	noc2l	NOC2-like nucleolar associated transcriptional repressor. (752 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (422 aa)
	ENSAMXP00000032529	Uncharacterized protein. (637 aa)
	nip7	NIP7 nucleolar pre-rRNA processing protein. (272 aa)
	mak16	Protein MAK16 homolog; Belongs to the MAK16 family. (309 aa)
	nifk	Nucleolar protein interacting with the FHA domain of MKI67. (272 aa)
	brix1	Brix domain containing 2. (345 aa)
	EBNA1BP2	EBNA1 binding protein 2. (228 aa)
	rpf1	Ribosome production factor 1 homolog. (357 aa)
	wdr74	WD repeat domain 74. (382 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOP1	EBNA1BP2	ENSAMXP00000011870	ENSAMXP00000043758	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	EBNA1 binding protein 2.	0.940
BOP1	ENSAMXP00000032529	ENSAMXP00000011870	ENSAMXP00000032529	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.960
BOP1	PES1	ENSAMXP00000011870	ENSAMXP00000001242	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.995
BOP1	W5KBY5_ASTMX	ENSAMXP00000011870	ENSAMXP00000005096	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar complex protein 3 homolog.	0.964
BOP1	brix1	ENSAMXP00000011870	ENSAMXP00000041627	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain containing 2.	0.965
BOP1	gnl3l	ENSAMXP00000011870	ENSAMXP00000006543	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Guanine nucleotide binding protein-like 3 (nucleolar)-like.	0.966
BOP1	mak16	ENSAMXP00000011870	ENSAMXP00000036630	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.900
BOP1	nifk	ENSAMXP00000011870	ENSAMXP00000038250	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar protein interacting with the FHA domain of MKI67.	0.944
BOP1	nip7	ENSAMXP00000011870	ENSAMXP00000034711	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	NIP7 nucleolar pre-rRNA processing protein.	0.934
BOP1	noc2l	ENSAMXP00000011870	ENSAMXP00000013269	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	NOC2-like nucleolar associated transcriptional repressor.	0.974
BOP1	rpf1	ENSAMXP00000011870	ENSAMXP00000051801	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome production factor 1 homolog.	0.921
BOP1	rsl1d1	ENSAMXP00000011870	ENSAMXP00000008869	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal L1 domain containing 1.	0.967
BOP1	wdr12	ENSAMXP00000011870	ENSAMXP00000028307	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.995
BOP1	wdr74	ENSAMXP00000011870	ENSAMXP00000054932	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD repeat domain 74.	0.977
EBNA1BP2	BOP1	ENSAMXP00000043758	ENSAMXP00000011870	EBNA1 binding protein 2.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.940
EBNA1BP2	ENSAMXP00000032529	ENSAMXP00000043758	ENSAMXP00000032529	EBNA1 binding protein 2.	Uncharacterized protein.	0.982
EBNA1BP2	PES1	ENSAMXP00000043758	ENSAMXP00000001242	EBNA1 binding protein 2.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.988
EBNA1BP2	W5KBY5_ASTMX	ENSAMXP00000043758	ENSAMXP00000005096	EBNA1 binding protein 2.	Nucleolar complex protein 3 homolog.	0.969
EBNA1BP2	brix1	ENSAMXP00000043758	ENSAMXP00000041627	EBNA1 binding protein 2.	Brix domain containing 2.	0.989
EBNA1BP2	gnl3l	ENSAMXP00000043758	ENSAMXP00000006543	EBNA1 binding protein 2.	Guanine nucleotide binding protein-like 3 (nucleolar)-like.	0.975