STRINGSTRING
W5K0M5_ASTMX W5K0M5_ASTMX tgfb1 tgfb1 fzd4 fzd4 itgb8 itgb8 hoxd4 hoxd4 LOC103024607 LOC103024607 LOC103023715 LOC103023715 LOC103044564 LOC103044564 W5L798_ASTMX W5L798_ASTMX LOC103021321 LOC103021321 tgfbr2 tgfbr2 krit1 krit1 LOC103039499 LOC103039499 LOC103025241 LOC103025241 W5LSB9_ASTMX W5LSB9_ASTMX Ackr3 Ackr3 LOC103039898 LOC103039898 cited1 cited1 ENSAMXP00000027863 ENSAMXP00000027863 LOC103025318 LOC103025318 setd2 setd2 sgpl1 sgpl1 nrp1 nrp1 wnt7a wnt7a smo smo Sox18 Sox18 ccm2 ccm2 Mib1 Mib1 ENSAMXP00000038206 ENSAMXP00000038206 TMEM100 TMEM100 LOC103035447 LOC103035447 rasa1 rasa1 zfpm2 zfpm2 ENSAMXP00000042370 ENSAMXP00000042370 LOC103042559 LOC103042559 ENSAMXP00000044862 ENSAMXP00000044862 LOC103026929 LOC103026929 glmn glmn TMEM100-2 TMEM100-2 Tal1 Tal1 tbx20 tbx20 LOC103029179 LOC103029179 Wars2 Wars2 wnt7b wnt7b apela apela hey2 hey2 ENSAMXP00000047691 ENSAMXP00000047691
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5K0M5_ASTMXAdhesion G protein-coupled receptor A2; Belongs to the G-protein coupled receptor 2 family. (1285 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
fzd4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (526 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (790 aa)
hoxd4Homeobox D4a. (256 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
LOC103023715Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (862 aa)
LOC103044564Receptor (G protein-coupled) activity modifying protein 2. (208 aa)
W5L798_ASTMXYes-associated protein 1. (431 aa)
LOC103021321SRY-box transcription factor 17. (428 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
krit1KRIT1 ankyrin repeat containing. (741 aa)
LOC103039499Uncharacterized protein. (686 aa)
LOC103025241Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (359 aa)
W5LSB9_ASTMXApelin receptor b; Belongs to the G-protein coupled receptor 1 family. (364 aa)
Ackr3Atypical chemokine receptor 3b; Belongs to the G-protein coupled receptor 1 family. (375 aa)
LOC103039898Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family. (366 aa)
cited1Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (155 aa)
ENSAMXP00000027863Uncharacterized protein. (169 aa)
LOC103025318NK2 homeobox 5. (313 aa)
setd2SET domain containing 2, histone lysine methyltransferase. (2886 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (572 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (924 aa)
wnt7aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (840 aa)
Sox18SRY-box transcription factor 18. (470 aa)
ccm2CCM2 scaffold protein. (456 aa)
Mib1Mindbomb E3 ubiquitin protein ligase 1. (1027 aa)
ENSAMXP00000038206JunB proto-oncogene, AP-1 transcription factor subunit b. (300 aa)
TMEM100Uncharacterized protein. (139 aa)
LOC103035447Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family. (265 aa)
rasa1RAS p21 protein activator (GTPase activating protein) 1a. (1045 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1151 aa)
ENSAMXP00000042370Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
ENSAMXP00000044862Uncharacterized protein. (116 aa)
LOC103026929Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (356 aa)
glmnGlomulin, FKBP associated protein a. (590 aa)
TMEM100-2Transmembrane protein 100. (147 aa)
Tal1T-cell acute lymphocytic leukemia 1. (371 aa)
tbx20T-box transcription factor 20. (441 aa)
LOC103029179Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (147 aa)
Wars2Tryptophanyl tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (375 aa)
wnt7bProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
apelaUncharacterized protein. (55 aa)
hey2Hes-related family bHLH transcription factor with YRPW motif 2. (315 aa)
ENSAMXP00000047691Uncharacterized protein. (118 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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